Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AC078795.2-201ENST00000602835 1252 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AC008121.3-201ENST00000618726 433 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AL159153.1-201ENST00000619688 317 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AC022418.1-201ENST00000624118 445 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 ZNF680P1-201ENST00000436625 1469 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
SHMT2P34897 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-655P-201ENST00000362858 107 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-1210P-201ENST00000363775 107 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 Y_RNA.324-201ENST00000365165 102 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 SNORA25B-201ENST00000365507 128 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-1274P-201ENST00000384557 107 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 Y_RNA.553-201ENST00000384670 102 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 SNORA16.2-201ENST00000390991 127 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 BTF3L4P1-201ENST00000413813 468 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 EDDM3CP-201ENST00000415977 425 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.79□□□□□ -2.12
SHMT2P34897 MTATP6P18-201ENST00000417994 673 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.79□□□□□ -2.12
SHMT2P34897 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.79□□□□□ -2.12
SHMT2P34897 MTCO1P19-201ENST00000443487 500 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.79□□□□□ -2.12
SHMT2P34897 GMFBP1-201ENST00000467831 427 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC006512.1-201ENST00000468816 291 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC010424.1-201ENST00000506336 297 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 SNORA4.4-201ENST00000515921 135 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU2-69P-201ENST00000516061 100 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RNU6-586P-201ENST00000517265 104 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.79□□□□□ -2.12
SHMT2P34897 AC007375.1-201ENST00000554513 578 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC233702.2-202ENST00000562547 291 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 RSL24D1P11-201ENST00000591045 491 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC119751.7-201ENST00000600494 245 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC091834.1-201ENST00000614543 472 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 AC009509.4-201ENST00000619202 509 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 U4.7-201ENST00000638126 106 ntBASIC1.79□□□□□ -2.12
SHMT2P34897 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHMT2P34897 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SHMT2P34897 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SHMT2P34897 RNY3P9-201ENST00000384727 106 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 RNA5SP270-201ENST00000411361 118 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.78□□□□□ -2.12
SHMT2P34897 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.78□□□□□ -2.12
SHMT2P34897 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
SHMT2P34897 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.78□□□□□ -2.12
SHMT2P34897 AL356010.1-201ENST00000456364 102 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.78□□□□□ -2.12
SHMT2P34897 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.78□□□□□ -2.12
SHMT2P34897 AC116337.1-201ENST00000509680 687 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 RN7SKP219-201ENST00000516825 296 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AC034114.1-201ENST00000520293 285 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.78□□□□□ -2.12
SHMT2P34897 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
SHMT2P34897 AC008752.3-201ENST00000588113 712 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AL391646.1-201ENST00000603860 190 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AC123912.5-201ENST00000605470 343 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 AC022202.1-201ENST00000613515 211 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.78□□□□□ -2.12
SHMT2P34897 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHMT2P34897 RNU6-552P-201ENST00000362869 119 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 RNU6-1120P-201ENST00000362988 108 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 RNU6-105P-201ENST00000363909 104 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 MIR561-201ENST00000385216 97 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 CBX3P9-201ENST00000402326 552 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.77□□□□□ -2.13
SHMT2P34897 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHMT2P34897 MTCO2P16-201ENST00000436962 677 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 FDX1P2-201ENST00000450769 375 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.77□□□□□ -2.13
SHMT2P34897 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 RPL30P12-201ENST00000474666 353 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.77□□□□□ -2.13
SHMT2P34897 MTCO3P7-201ENST00000510008 774 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 LRRC34P2-201ENST00000514850 553 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 Y_RNA.688-201ENST00000516565 95 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 RNA5SP137-201ENST00000516833 135 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHMT2P34897 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.77□□□□□ -2.13
SHMT2P34897 AC023050.3-201ENST00000541142 333 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 MTCO3P23-201ENST00000561363 289 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC104984.5-201ENST00000586878 94 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.77□□□□□ -2.13
SHMT2P34897 AC011494.1-201ENST00000596454 237 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AL136363.2-201ENST00000604173 851 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms