Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A1P02462 AP000811.1-201ENST00000603803 651 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC091152.3-201ENST00000604227 325 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC135507.1-201ENST00000607214 561 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-91P-201ENST00000607774 107 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 TUSC7.1-201ENST00000610969 165 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL359547.2-201ENST00000615810 418 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MIR7844-201ENST00000616161 122 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MIR7157-201ENST00000635801 60 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 Z99571.1-201ENST00000636677 394 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.04□□□□□ -2.24
COL4A1P02462 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A1P02462 TEX21P-201ENST00000447107 1476 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 MIR518D-201ENST00000385014 87 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 NDUFS5P1-201ENST00000405668 289 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 RNU6-1025P-201ENST00000410629 104 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 Y_RNA.608-201ENST00000410647 95 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 RNA5SP111-201ENST00000411386 101 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 RPL26P27-201ENST00000414397 437 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.03□□□□□ -2.24
COL4A1P02462 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A1P02462 MTND4P20-201ENST00000424125 869 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 PTGES3P4-201ENST00000426243 356 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A1P02462 AL627311.1-201ENST00000431514 115 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC016691.1-201ENST00000441321 413 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A1P02462 RPL23AP6-201ENST00000446637 472 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A1P02462 GAPDHP17-201ENST00000449858 1001 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC012308.1-201ENST00000451232 178 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A1P02462 snoU109.2-201ENST00000459316 135 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 RPL31P58-201ENST00000469001 379 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.03□□□□□ -2.24
COL4A1P02462 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A1P02462 RPL30P6-201ENST00000475925 342 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC109927.2-201ENST00000506416 303 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AC023141.11-201ENST00000508864 202 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 RNA5SP395-201ENST00000516567 118 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A1P02462 AC022022.2-201ENST00000602989 360 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AL021997.1-201ENST00000605757 193 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 AL589743.7-201ENST00000612637 233 ntBASIC1.03□□□□□ -2.24
COL4A1P02462 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A1P02462 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
COL4A1P02462 MTND5P30-201ENST00000452896 1731 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.02□□□□□ -2.25
COL4A1P02462 ZNF702P-202ENST00000434269 1966 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 SNORD114-19-201ENST00000363072 75 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 RNY4P16-201ENST00000364768 94 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 RNU6-748P-201ENST00000384648 107 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AL160275.3-201ENST00000423876 471 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AC007283.2-201ENST00000424739 197 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 AC093106.2-201ENST00000428212 385 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 BTF3P15-201ENST00000455606 336 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 RNU7-193P-201ENST00000516723 65 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.02□□□□□ -2.25
COL4A1P02462 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.02□□□□□ -2.25
COL4A1P02462 AP003122.4-201ENST00000530980 758 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 AL157871.3-201ENST00000557231 293 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.02□□□□□ -2.25
COL4A1P02462 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A1P02462 MIR3915-201ENST00000578518 97 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.02□□□□□ -2.25
COL4A1P02462 SNORD14A-201ENST00000606526 91 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AC069294.1-201ENST00000608397 350 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.02□□□□□ -2.25
COL4A1P02462 AC017037.3-201ENST00000625016 472 ntBASIC1.02□□□□□ -2.25
COL4A1P02462 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL4A1P02462 Z75746.1-201ENST00000440243 2080 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 RNU6-858P-201ENST00000362436 107 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 Y_RNA.258-201ENST00000364613 105 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 RNA5SP125-201ENST00000364843 120 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 MIR218-1-201ENST00000384999 110 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 MIR301A-201ENST00000385261 86 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 RNU2-36P-201ENST00000410361 191 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC127391.1-201ENST00000411737 98 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AL365338.1-201ENST00000422282 858 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A1P02462 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A1P02462 AP000797.1-201ENST00000478870 387 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC027575.1-201ENST00000481064 460 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC112204.1-201ENST00000502591 103 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A1P02462 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A1P02462 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 MTATP6P15-201ENST00000527233 835 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC011979.2-201ENST00000527568 352 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 BNIP3P6-201ENST00000549284 499 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms