Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-701P-201ENST00000384059 107 ntBASIC2.54□□□□□ -2
COL2A1P02458 RNU6-306P-201ENST00000384617 107 ntBASIC2.54□□□□□ -2
COL2A1P02458 RNU2-21P-201ENST00000410368 188 ntBASIC2.54□□□□□ -2
COL2A1P02458 UBE2FP1-201ENST00000416536 447 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC114482.1-201ENST00000418010 247 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC108667.1-201ENST00000428618 249 ntBASIC2.54□□□□□ -2
COL2A1P02458 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
COL2A1P02458 MTND2P29-201ENST00000438595 412 ntBASIC2.54□□□□□ -2
COL2A1P02458 ELOCP24-201ENST00000456370 334 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
COL2A1P02458 Y_RNA.654-201ENST00000497848 106 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.54□□□□□ -2
COL2A1P02458 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.54□□□□□ -2
COL2A1P02458 AC108078.2-201ENST00000510750 236 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC016065.2-201ENST00000514530 444 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.54□□□□□ -2
COL2A1P02458 MTCO2P24-201ENST00000515611 426 ntBASIC2.54□□□□□ -2
COL2A1P02458 Y_RNA.670-201ENST00000516255 105 ntBASIC2.54□□□□□ -2
COL2A1P02458 AL137161.1-201ENST00000532231 390 ntBASIC2.54□□□□□ -2
COL2A1P02458 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.54□□□□□ -2
COL2A1P02458 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
COL2A1P02458 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
COL2A1P02458 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
COL2A1P02458 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.54□□□□□ -2
COL2A1P02458 AL669831.4-202ENST00000590817 238 ntBASIC2.54□□□□□ -2
COL2A1P02458 AL512605.2-201ENST00000592972 256 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC009229.3-201ENST00000608056 282 ntBASIC2.54□□□□□ -2
COL2A1P02458 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.54□□□□□ -2
COL2A1P02458 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
COL2A1P02458 AC010378.1-201ENST00000619270 362 ntBASIC2.54□□□□□ -2
COL2A1P02458 GABPAP-201ENST00000419271 1356 ntBASIC2.54□□□□□ -2
COL2A1P02458 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
COL2A1P02458 AC010733.2-201ENST00000589496 5702 ntBASIC2.54□□□□□ -2
COL2A1P02458 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL2A1P02458 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.54□□□□□ -2
COL2A1P02458 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL2A1P02458 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL2A1P02458 Y_RNA.116-201ENST00000363292 103 ntBASIC2.53□□□□□ -2
COL2A1P02458 Y_RNA.135-201ENST00000363439 95 ntBASIC2.53□□□□□ -2
COL2A1P02458 Y_RNA.364-201ENST00000365532 101 ntBASIC2.53□□□□□ -2
COL2A1P02458 SNORA75B-201ENST00000384053 137 ntBASIC2.53□□□□□ -2
COL2A1P02458 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
COL2A1P02458 Y_RNA.482-201ENST00000384377 111 ntBASIC2.53□□□□□ -2
COL2A1P02458 MIR499A-201ENST00000384903 122 ntBASIC2.53□□□□□ -2
COL2A1P02458 MIR518E-201ENST00000385252 88 ntBASIC2.53□□□□□ -2
COL2A1P02458 SNORD70.1-201ENST00000391007 85 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU6-550P-201ENST00000391057 101 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU2-2P-201ENST00000410396 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 AC092447.6-201ENST00000414578 210 ntBASIC2.53□□□□□ -2
COL2A1P02458 RPS15AP40-201ENST00000419621 391 ntBASIC2.53□□□□□ -2
COL2A1P02458 CALM2P2-201ENST00000428512 440 ntBASIC2.53□□□□□ -2
COL2A1P02458 RPS26P56-201ENST00000444468 240 ntBASIC2.53□□□□□ -2
COL2A1P02458 RPS15AP27-201ENST00000449183 343 ntBASIC2.53□□□□□ -2
COL2A1P02458 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
COL2A1P02458 PCNPP5-201ENST00000452246 481 ntBASIC2.53□□□□□ -2
COL2A1P02458 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.53□□□□□ -2
COL2A1P02458 RNU7-59P-201ENST00000459101 61 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU6-388P-201ENST00000517012 105 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU6-389P-201ENST00000517048 105 ntBASIC2.53□□□□□ -2
COL2A1P02458 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.53□□□□□ -2
COL2A1P02458 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.53□□□□□ -2
COL2A1P02458 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.53□□□□□ -2
COL2A1P02458 AL109918.3-201ENST00000603072 338 ntBASIC2.53□□□□□ -2
COL2A1P02458 CYP2C61P-201ENST00000604072 290 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.15-201ENST00000611544 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.16-201ENST00000613119 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.12-201ENST00000613778 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.20-201ENST00000613956 192 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.9-201ENST00000615427 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.11-201ENST00000616345 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.2-201ENST00000616535 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.3-201ENST00000617785 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.19-201ENST00000618602 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 RNU2-1-201ENST00000618664 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.6-201ENST00000619225 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.5-201ENST00000619465 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U2.10-201ENST00000620268 191 ntBASIC2.53□□□□□ -2
COL2A1P02458 U4.1-201ENST00000620349 87 ntBASIC2.53□□□□□ -2
COL2A1P02458 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
COL2A1P02458 AC091812.1-201ENST00000432235 1948 ntBASIC2.53□□□□□ -2
COL2A1P02458 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL2A1P02458 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
COL2A1P02458 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
COL2A1P02458 KPNA2P1-201ENST00000458289 1591 ntBASIC2.53□□□□□ -2.01
COL2A1P02458 Y_RNA.112-201ENST00000363250 102 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.158-201ENST00000363651 101 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-1059P-201ENST00000363752 98 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-263P-201ENST00000363811 107 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.188-201ENST00000363952 111 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-432P-201ENST00000384196 109 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.463-201ENST00000384271 102 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNY1P14-201ENST00000384426 108 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.496-201ENST00000384444 101 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL2A1P02458 AL139397.2-201ENST00000404529 772 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 MIR1302-3-201ENST00000408128 138 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU4-78P-201ENST00000410940 126 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-516P-201ENST00000411381 104 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms