Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MTND3P17-201ENST00000416968 344 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 MTND2P18-201ENST00000419962 1030 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.24□□□□□ -2.21
CPSF4O95639 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF4O95639 TOMM20P4-201ENST00000427861 435 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.24□□□□□ -2.21
CPSF4O95639 GPR143P-201ENST00000434155 205 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 DNAJC19P4-201ENST00000440115 345 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.24□□□□□ -2.21
CPSF4O95639 RPL23AP6-201ENST00000446637 472 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.24□□□□□ -2.21
CPSF4O95639 SNRPGP9-201ENST00000456025 225 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AL162395.1-201ENST00000457882 422 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 RPL30P12-201ENST00000474666 353 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 HMGB1P35-201ENST00000503360 598 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.24□□□□□ -2.21
CPSF4O95639 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF4O95639 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF4O95639 AP003392.2-201ENST00000527269 208 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 CYCSP27-201ENST00000527643 293 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF4O95639 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.24□□□□□ -2.21
CPSF4O95639 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF4O95639 MIR98-201ENST00000606724 119 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.24□□□□□ -2.21
CPSF4O95639 Z82243.1-201ENST00000609432 473 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AC091931.1-201ENST00000623488 728 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.24□□□□□ -2.21
CPSF4O95639 U6.114-201ENST00000636407 96 ntBASIC1.24□□□□□ -2.21
CPSF4O95639 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.23□□□□□ -2.21
CPSF4O95639 FGF7P2-201ENST00000332473 296 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CPSF4O95639 RNU1-17P-201ENST00000363022 152 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 RNU6-1210P-201ENST00000363775 107 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 RNU6-45P-201ENST00000384471 107 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 RNY3P10-201ENST00000384764 102 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 MIR518A2-201ENST00000384966 87 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
CPSF4O95639 CBX3P9-201ENST00000402326 552 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AL356432.1-201ENST00000405809 419 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 RNA5SP450-201ENST00000411206 102 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 OR9R1P-201ENST00000412200 877 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.23□□□□□ -2.21
CPSF4O95639 AC079781.2-201ENST00000446424 169 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 AL137159.1-201ENST00000452808 512 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AL353752.1-201ENST00000454946 260 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 snoU13.14-201ENST00000459372 104 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 SNORD42A-201ENST00000459584 64 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 MTCYBP18-201ENST00000501056 747 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 YWHAEP4-201ENST00000505390 198 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AC010486.2-201ENST00000505572 483 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 MTCYBP40-201ENST00000509390 1135 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 SNORA18.6-201ENST00000516792 115 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.23□□□□□ -2.21
CPSF4O95639 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.23□□□□□ -2.21
CPSF4O95639 AP003072.2-201ENST00000527756 676 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.23□□□□□ -2.21
CPSF4O95639 AP000763.2-201ENST00000540641 163 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.23□□□□□ -2.21
CPSF4O95639 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 MIR4775-201ENST00000581168 75 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AC078795.2-201ENST00000602835 1252 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 SEPT7P9-203ENST00000604116 343 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AC064872.1-201ENST00000604823 1072 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 Z84480.1-201ENST00000605131 311 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.23□□□□□ -2.21
CPSF4O95639 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 AC241585.2-209ENST00000638217 143 ntBASIC1.23□□□□□ -2.21
CPSF4O95639 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.23□□□□□ -2.21
CPSF4O95639 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPSF4O95639 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CPSF4O95639 snoU2_19.1-201ENST00000362361 80 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-1287P-201ENST00000362914 107 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-944P-201ENST00000364023 107 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-715P-201ENST00000365204 103 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU5E-7P-201ENST00000365290 117 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-1060P-201ENST00000384664 107 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 MIR1-2-201ENST00000384961 85 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 MIR454-201ENST00000390180 115 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU6-248P-201ENST00000410720 107 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 RNU2-32P-201ENST00000411193 191 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF4O95639 BTF3L4P1-201ENST00000413813 468 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF4O95639 BX295541.1-201ENST00000417774 250 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 AL121601.2-201ENST00000438019 707 ntBASIC1.22□□□□□ -2.21
CPSF4O95639 HSPE1P21-201ENST00000438283 308 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms