Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC107294.3-201ENST00000609211 526 ntBASIC2.76□□□□□ -1.97
LDB3O75112 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.76□□□□□ -1.97
LDB3O75112 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
LDB3O75112 MTND5P7-201ENST00000413558 1798 ntBASIC2.76□□□□□ -1.97
LDB3O75112 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.76□□□□□ -1.97
LDB3O75112 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.76□□□□□ -1.97
LDB3O75112 AC008669.1-201ENST00000565823 2178 ntBASIC2.76□□□□□ -1.97
LDB3O75112 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
LDB3O75112 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB3O75112 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB3O75112 AL035425.3-201ENST00000564206 4996 ntBASIC2.75□□□□□ -1.97
LDB3O75112 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
LDB3O75112 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB3O75112 Y_RNA.47-201ENST00000362697 108 ntBASIC2.75□□□□□ -1.97
LDB3O75112 RNY3P11-201ENST00000364153 102 ntBASIC2.75□□□□□ -1.97
LDB3O75112 SNORD14B-201ENST00000364533 90 ntBASIC2.75□□□□□ -1.97
LDB3O75112 RNU1-140P-201ENST00000365040 165 ntBASIC2.75□□□□□ -1.97
LDB3O75112 RNU6-214P-201ENST00000384130 107 ntBASIC2.75□□□□□ -1.97
LDB3O75112 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB3O75112 AL365496.1-201ENST00000426885 215 ntBASIC2.75□□□□□ -1.97
LDB3O75112 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB3O75112 U8.20-201ENST00000459445 131 ntBASIC2.75□□□□□ -1.97
LDB3O75112 S100A11P2-201ENST00000467589 312 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC006483.1-201ENST00000487308 313 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC092185.1-201ENST00000491371 97 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC105758.1-201ENST00000506038 399 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.75□□□□□ -1.97
LDB3O75112 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB3O75112 AC109446.1-201ENST00000566172 220 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB3O75112 AC113195.1-201ENST00000579952 141 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB3O75112 AC006006.1-201ENST00000603082 144 ntBASIC2.75□□□□□ -1.97
LDB3O75112 AC092447.9-201ENST00000603395 144 ntBASIC2.75□□□□□ -1.97
LDB3O75112 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
LDB3O75112 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB3O75112 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
LDB3O75112 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB3O75112 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB3O75112 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LDB3O75112 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
LDB3O75112 ZNF72P-201ENST00000425869 1908 ntBASIC2.74□□□□□ -1.97
LDB3O75112 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LDB3O75112 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LDB3O75112 RNU6-490P-201ENST00000362985 107 ntBASIC2.74□□□□□ -1.97
LDB3O75112 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
LDB3O75112 SET-203ENST00000372688 801 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB3O75112 RNU6-658P-201ENST00000384606 106 ntBASIC2.74□□□□□ -1.97
LDB3O75112 MIR34A-201ENST00000385130 110 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AL445529.1-201ENST00000398713 389 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC096664.2-201ENST00000411843 406 ntBASIC2.74□□□□□ -1.97
LDB3O75112 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.74□□□□□ -1.97
LDB3O75112 EEF1A1P41-201ENST00000414667 207 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC114482.1-201ENST00000418010 247 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB3O75112 MTCYBP10-201ENST00000424905 650 ntBASIC2.74□□□□□ -1.97
LDB3O75112 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB3O75112 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB3O75112 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB3O75112 RPS29P26-201ENST00000477483 171 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB3O75112 AC018437.1-201ENST00000492214 406 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 RNU4-77P-201ENST00000516692 156 ntBASIC2.74□□□□□ -1.97
LDB3O75112 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LDB3O75112 NACAP3-201ENST00000552100 481 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB3O75112 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AL121917.1-203ENST00000605534 577 ntBASIC2.74□□□□□ -1.97
LDB3O75112 AC090425.1-201ENST00000610007 140 ntBASIC2.74□□□□□ -1.97
LDB3O75112 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LDB3O75112 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
LDB3O75112 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB3O75112 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB3O75112 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB3O75112 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB3O75112 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB3O75112 Y_RNA.452-201ENST00000384202 108 ntBASIC2.73□□□□□ -1.97
LDB3O75112 SNORA44-201ENST00000384584 132 ntBASIC2.73□□□□□ -1.97
LDB3O75112 MIR10A-201ENST00000385043 110 ntBASIC2.73□□□□□ -1.97
LDB3O75112 MIR483-201ENST00000385070 76 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB3O75112 UBE2V1P4-201ENST00000425374 344 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC096644.2-201ENST00000429278 159 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL133396.1-201ENST00000432048 687 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL353997.1-201ENST00000432936 108 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL645568.3-201ENST00000433683 316 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL353752.1-201ENST00000454946 260 ntBASIC2.73□□□□□ -1.97
LDB3O75112 RPL26P9-201ENST00000457466 433 ntBASIC2.73□□□□□ -1.97
LDB3O75112 RPS29P12-201ENST00000460178 152 ntBASIC2.73□□□□□ -1.97
LDB3O75112 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms