Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
GRIN3BO60391 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
GRIN3BO60391 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GRIN3BO60391 Y_RNA.14-201ENST00000362415 103 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 Y_RNA.27-201ENST00000362540 103 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 Z98749.2-208ENST00000381646 500 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 MIR518D-201ENST00000385014 87 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 SNORA12.2-201ENST00000391040 156 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.24□□□□□ -1.73
GRIN3BO60391 LINC00933-203ENST00000559812 219 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AMZ2P1-203ENST00000565833 850 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 MIR3690-201ENST00000580266 75 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AC132825.6-201ENST00000638861 357 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 AP000560.1-201ENST00000624150 1937 ntBASIC4.24□□□□□ -1.73
GRIN3BO60391 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GRIN3BO60391 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
GRIN3BO60391 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 RNU6-50P-201ENST00000362356 103 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.19-201ENST00000362462 99 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 RNU6-778P-201ENST00000363269 103 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.123-201ENST00000363338 102 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.183-201ENST00000363882 113 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 U3.13-201ENST00000364804 214 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.376-201ENST00000365638 108 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.462-201ENST00000384268 102 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 Y_RNA.471-201ENST00000384312 102 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 BTF3L4P2-201ENST00000392798 346 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 RNU2-14P-201ENST00000411053 191 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.23□□□□□ -1.73
GRIN3BO60391 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.23□□□□□ -1.73
GRIN3BO60391 RPEP5-201ENST00000441137 268 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.23□□□□□ -1.73
GRIN3BO60391 MTND4LP30-201ENST00000454092 297 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.23□□□□□ -1.73
GRIN3BO60391 SNORA43.2-201ENST00000516652 128 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 RNU6-111P-201ENST00000517179 105 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 MIR2355-201ENST00000517199 87 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.23□□□□□ -1.73
GRIN3BO60391 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.23□□□□□ -1.73
GRIN3BO60391 AC060766.3-201ENST00000591442 263 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 FAM35BP-202ENST00000497389 3337 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GRIN3BO60391 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 AL136360.1-201ENST00000503377 1900 ntBASIC4.23□□□□□ -1.73
GRIN3BO60391 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
GRIN3BO60391 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GRIN3BO60391 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GRIN3BO60391 RNU4-82P-201ENST00000362443 140 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 Y_RNA.26-201ENST00000362539 101 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 Y_RNA.64-201ENST00000362845 102 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 RNU6-125P-201ENST00000384505 107 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.22□□□□□ -1.73
GRIN3BO60391 AL513124.1-201ENST00000450410 614 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 PRELID3BP1-201ENST00000457142 540 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.22□□□□□ -1.73
GRIN3BO60391 RNU7-175P-201ENST00000515915 61 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 CASP1P1-201ENST00000526345 212 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.22□□□□□ -1.73
GRIN3BO60391 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GRIN3BO60391 HSPE1P20-201ENST00000538133 289 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 H3F3AP1-201ENST00000559984 334 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.22□□□□□ -1.73
GRIN3BO60391 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
GRIN3BO60391 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.22□□□□□ -1.73
GRIN3BO60391 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
GRIN3BO60391 Z75746.1-201ENST00000440243 2080 ntBASIC4.22□□□□□ -1.73
GRIN3BO60391 UBE3AP2-201ENST00000429033 2259 ntBASIC4.21□□□□□ -1.73
GRIN3BO60391 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
GRIN3BO60391 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.21□□□□□ -1.74
GRIN3BO60391 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GRIN3BO60391 RNU1-73P-201ENST00000383971 164 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 RNU6-886P-201ENST00000384319 105 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 Y_RNA.515-201ENST00000384535 112 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 MTCO3P29-201ENST00000432119 779 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 RPL37P4-201ENST00000448908 268 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.21□□□□□ -1.74
GRIN3BO60391 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.21□□□□□ -1.74
GRIN3BO60391 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.21□□□□□ -1.74
GRIN3BO60391 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.21□□□□□ -1.74
GRIN3BO60391 Y_RNA.673-201ENST00000516306 88 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 AL442163.3-201ENST00000554110 156 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 MIR4769-201ENST00000584126 77 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 RPL23AP78-201ENST00000599928 470 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 MIR7843-201ENST00000622274 79 ntBASIC4.21□□□□□ -1.74
GRIN3BO60391 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GRIN3BO60391 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.2□□□□□ -1.74
GRIN3BO60391 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GRIN3BO60391 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms