Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.56□□□□□ -2.16
CLOCKO15516 AC027575.1-201ENST00000481064 460 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AC009646.1-201ENST00000510455 318 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.56□□□□□ -2.16
CLOCKO15516 AC022022.2-201ENST00000602989 360 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AL136370.1-201ENST00000608166 691 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AL133173.2-201ENST00000614270 90 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 U4.7-201ENST00000638126 106 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 MTND5P17-201ENST00000418405 1603 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CLOCKO15516 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CLOCKO15516 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CLOCKO15516 SNORA62.1-201ENST00000364287 154 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 SNORD115-7-201ENST00000365306 82 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 MIR544A-201ENST00000384855 91 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.55□□□□□ -2.16
CLOCKO15516 CYCSP33-201ENST00000414485 327 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 OR6C66P-201ENST00000414917 930 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.55□□□□□ -2.16
CLOCKO15516 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.55□□□□□ -2.16
CLOCKO15516 AL360221.1-201ENST00000445989 335 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.55□□□□□ -2.16
CLOCKO15516 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.55□□□□□ -2.16
CLOCKO15516 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.55□□□□□ -2.16
CLOCKO15516 AC104806.1-201ENST00000508720 308 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC074344.1-201ENST00000512823 224 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC104136.1-201ENST00000512969 394 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 RNU5F-2P-201ENST00000516066 82 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC115990.1-201ENST00000526957 301 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AP005435.4-201ENST00000529514 284 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.55□□□□□ -2.16
CLOCKO15516 RMST_6.1-201ENST00000611980 203 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 Z69720.2-201ENST00000624755 279 ntBASIC1.55□□□□□ -2.16
CLOCKO15516 Y_RNA.338-201ENST00000365320 114 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 RNU6-116P-201ENST00000384042 109 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.54□□□□□ -2.16
CLOCKO15516 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.54□□□□□ -2.16
CLOCKO15516 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.54□□□□□ -2.16
CLOCKO15516 AL603825.1-201ENST00000438481 80 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AC073614.1-201ENST00000438690 650 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.54□□□□□ -2.16
CLOCKO15516 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.54□□□□□ -2.16
CLOCKO15516 AC005178.1-201ENST00000508392 440 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 Vault.3-201ENST00000516676 95 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
CLOCKO15516 AC090572.1-201ENST00000519251 160 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
CLOCKO15516 AP000942.3-201ENST00000603702 160 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 AC010900.2-201ENST00000604508 210 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 MTND4P4-201ENST00000439033 1366 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLOCKO15516 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
CLOCKO15516 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.54□□□□□ -2.16
CLOCKO15516 CBX3P1-201ENST00000325243 554 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 RNU6-45P-201ENST00000384471 107 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.53□□□□□ -2.16
CLOCKO15516 KATNBL1P3-201ENST00000443475 909 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AL035666.1-201ENST00000446195 348 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 SNRPFP4-201ENST00000456366 242 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 RNU6-333P-201ENST00000459117 107 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AL356057.1-201ENST00000533798 831 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AC087883.1-201ENST00000551882 391 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.53□□□□□ -2.16
CLOCKO15516 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.53□□□□□ -2.16
CLOCKO15516 AC234772.3-201ENST00000602277 528 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AC018889.1-201ENST00000605372 397 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 AP000654.2-201ENST00000605633 586 ntBASIC1.53□□□□□ -2.16
CLOCKO15516 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CLOCKO15516 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
CLOCKO15516 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CLOCKO15516 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.52□□□□□ -2.17
CLOCKO15516 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CLOCKO15516 RNU6-1285P-201ENST00000363480 105 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CLOCKO15516 RNU6-160P-201ENST00000384591 107 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.52□□□□□ -2.17
CLOCKO15516 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLOCKO15516 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLOCKO15516 AC108667.1-201ENST00000428618 249 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 MTND5P25-201ENST00000430499 799 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.52□□□□□ -2.17
CLOCKO15516 RN7SKP210-201ENST00000459176 261 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
CLOCKO15516 RNU6-1129P-201ENST00000515964 104 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.52□□□□□ -2.17
CLOCKO15516 MIR3198-2-201ENST00000577868 80 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AC103987.3-201ENST00000582071 292 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AC090616.2-202ENST00000584248 222 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 BNIP3P8-201ENST00000597863 560 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms