Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
MSH4O15457 AC008945.2-201ENST00000606056 604 ntBASIC1.91□□□□□ -2.1
MSH4O15457 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
MSH4O15457 RNU4-48P-201ENST00000365559 182 ntBASIC1.9□□□□□ -2.11
MSH4O15457 RNU4-46P-201ENST00000410818 138 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AL031667.1-201ENST00000440222 725 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
MSH4O15457 AC006512.1-201ENST00000468816 291 ntBASIC1.9□□□□□ -2.11
MSH4O15457 RPL30P12-201ENST00000474666 353 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AC018868.1-201ENST00000491307 315 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.9□□□□□ -2.11
MSH4O15457 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
MSH4O15457 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.9□□□□□ -2.11
MSH4O15457 Y_RNA.695-201ENST00000516715 107 ntBASIC1.9□□□□□ -2.11
MSH4O15457 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
MSH4O15457 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.9□□□□□ -2.11
MSH4O15457 AP002963.1-201ENST00000530590 184 ntBASIC1.9□□□□□ -2.11
MSH4O15457 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.9□□□□□ -2.11
MSH4O15457 AC072046.2-201ENST00000618366 268 ntBASIC1.9□□□□□ -2.11
MSH4O15457 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
MSH4O15457 AL390237.1-201ENST00000404226 1415 ntBASIC1.9□□□□□ -2.11
MSH4O15457 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 RNU6-1210P-201ENST00000363775 107 ntBASIC1.89□□□□□ -2.11
MSH4O15457 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AL669831.1-202ENST00000428504 417 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.89□□□□□ -2.11
MSH4O15457 AL358934.1-201ENST00000432346 324 ntBASIC1.89□□□□□ -2.11
MSH4O15457 GTF2IP13-201ENST00000438487 386 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.89□□□□□ -2.11
MSH4O15457 MTND1P18-201ENST00000448191 573 ntBASIC1.89□□□□□ -2.11
MSH4O15457 C1DP4-201ENST00000455429 424 ntBASIC1.89□□□□□ -2.11
MSH4O15457 SNORD13-201ENST00000459299 104 ntBASIC1.89□□□□□ -2.11
MSH4O15457 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
MSH4O15457 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.89□□□□□ -2.11
MSH4O15457 AC034114.1-201ENST00000520293 285 ntBASIC1.89□□□□□ -2.11
MSH4O15457 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 AC233702.2-202ENST00000562547 291 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.89□□□□□ -2.11
MSH4O15457 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
MSH4O15457 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.89□□□□□ -2.11
MSH4O15457 ELOCP5-201ENST00000604924 333 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC109347.2-201ENST00000610220 349 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC099842.1-201ENST00000619919 596 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC007792.1-201ENST00000623023 402 ntBASIC1.89□□□□□ -2.11
MSH4O15457 AC009161.2-201ENST00000624626 138 ntBASIC1.89□□□□□ -2.11
MSH4O15457 RNU6-527P-201ENST00000363425 104 ntBASIC1.88□□□□□ -2.11
MSH4O15457 RNU6-1303P-201ENST00000364841 107 ntBASIC1.88□□□□□ -2.11
MSH4O15457 Y_RNA.324-201ENST00000365165 102 ntBASIC1.88□□□□□ -2.11
MSH4O15457 SNORD116-8-201ENST00000384365 95 ntBASIC1.88□□□□□ -2.11
MSH4O15457 RNU6-1274P-201ENST00000384557 107 ntBASIC1.88□□□□□ -2.11
MSH4O15457 RNU2-9P-201ENST00000410194 145 ntBASIC1.88□□□□□ -2.11
MSH4O15457 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.88□□□□□ -2.11
MSH4O15457 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
MSH4O15457 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.88□□□□□ -2.11
MSH4O15457 AC098826.2-201ENST00000452011 651 ntBASIC1.88□□□□□ -2.11
MSH4O15457 snoU13.14-201ENST00000459372 104 ntBASIC1.88□□□□□ -2.11
MSH4O15457 AC107032.1-201ENST00000485945 480 ntBASIC1.88□□□□□ -2.11
MSH4O15457 MTCYBP40-201ENST00000509390 1135 ntBASIC1.88□□□□□ -2.11
MSH4O15457 RNU6-430P-201ENST00000517078 107 ntBASIC1.88□□□□□ -2.11
MSH4O15457 AC107953.1-201ENST00000522216 297 ntBASIC1.88□□□□□ -2.11
MSH4O15457 SUB1P2-201ENST00000556401 297 ntBASIC1.88□□□□□ -2.11
MSH4O15457 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
MSH4O15457 MIR4703-201ENST00000577728 79 ntBASIC1.88□□□□□ -2.11
MSH4O15457 AC068790.2-201ENST00000602601 557 ntBASIC1.88□□□□□ -2.11
MSH4O15457 Z99497.2-201ENST00000603634 310 ntBASIC1.88□□□□□ -2.11
MSH4O15457 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
MSH4O15457 AL158063.1-201ENST00000615349 536 ntBASIC1.88□□□□□ -2.11
MSH4O15457 Z69720.2-201ENST00000624755 279 ntBASIC1.88□□□□□ -2.11
MSH4O15457 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MSH4O15457 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
MSH4O15457 CBX3P9-201ENST00000402326 552 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 BTF3L4P1-201ENST00000413813 468 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AL591043.1-201ENST00000432461 424 ntBASIC1.87□□□□□ -2.11
MSH4O15457 USP9YP29-201ENST00000445112 563 ntBASIC1.87□□□□□ -2.11
MSH4O15457 PSPHP1-201ENST00000450062 261 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC055731.1-201ENST00000474387 401 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.87□□□□□ -2.11
MSH4O15457 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
MSH4O15457 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.87□□□□□ -2.11
MSH4O15457 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH4O15457 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
MSH4O15457 uc_338.11-201ENST00000619132 160 ntBASIC1.87□□□□□ -2.11
MSH4O15457 AC097372.5-201ENST00000623665 376 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms