Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL356583.2-201ENST00000426536 280 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 CALM2P2-201ENST00000428512 440 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 Z73417.1-201ENST00000447373 778 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 ZNF114P1-201ENST00000453500 292 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1AO00322 SNORD11.1-201ENST00000459482 85 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK1AO00322 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.27□□□□□ -2.21
UPK1AO00322 AP001893.2-201ENST00000526949 202 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1AO00322 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1AO00322 AC002400.1-201ENST00000569310 726 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1AO00322 AP000654.2-201ENST00000605633 586 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AC103810.8-201ENST00000607347 118 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 MIR7844-201ENST00000616161 122 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AL353997.5-201ENST00000618886 171 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RMST_7.1-201ENST00000621935 268 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK1AO00322 MIR1248-201ENST00000629190 106 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 CBX3P1-201ENST00000325243 554 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UPK1AO00322 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK1AO00322 MIR544A-201ENST00000384855 91 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 MIR30A-201ENST00000385092 71 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 MIR934-201ENST00000401241 83 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AL357139.1-201ENST00000407792 426 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.26□□□□□ -2.21
UPK1AO00322 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK1AO00322 AC027575.1-201ENST00000481064 460 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC116562.3-201ENST00000506136 177 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 MTND3P25-201ENST00000509243 135 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 FAM206BP-201ENST00000510179 541 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC115990.1-201ENST00000526957 301 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC068587.5-201ENST00000528506 175 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC022878.1-201ENST00000530684 149 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.26□□□□□ -2.21
UPK1AO00322 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.26□□□□□ -2.21
UPK1AO00322 AC008751.2-201ENST00000597885 980 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC022022.2-201ENST00000602989 360 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 AC091304.6-201ENST00000619761 202 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 U6.114-201ENST00000636407 96 ntBASIC1.26□□□□□ -2.21
UPK1AO00322 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK1AO00322 Y_RNA.22-201ENST00000362492 102 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU6-1214P-201ENST00000363650 109 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU6-116P-201ENST00000384042 109 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU6-1222P-201ENST00000384615 107 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK1AO00322 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK1AO00322 NCOR1P3-201ENST00000420479 303 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC007969.2-201ENST00000441891 191 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK1AO00322 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK1AO00322 TPT1P8-201ENST00000510120 555 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 SNORA3.4-201ENST00000515969 96 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC022616.3-201ENST00000523940 148 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK1AO00322 RPL21P5-201ENST00000554662 472 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK1AO00322 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK1AO00322 AC005771.1-201ENST00000585581 349 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK1AO00322 AL133173.2-201ENST00000614270 90 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RMST_4.1-201ENST00000616886 107 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC097372.5-201ENST00000623665 376 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 AC068787.1-201ENST00000623908 691 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 WWP1P1-201ENST00000466609 2769 ntBASIC1.25□□□□□ -2.21
UPK1AO00322 RNU4-28P-201ENST00000364739 141 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
UPK1AO00322 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
UPK1AO00322 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 MTND4P20-201ENST00000424125 869 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC000111.3-201ENST00000433478 193 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 UBE2D3P4-201ENST00000441973 436 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AL035666.1-201ENST00000446195 348 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK1AO00322 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC098862.1-201ENST00000504991 413 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC104806.1-201ENST00000508720 308 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC009646.1-201ENST00000510455 318 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC074344.1-201ENST00000512823 224 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 RNU6-685P-201ENST00000517088 95 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1AO00322 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1AO00322 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK1AO00322 AL121992.2-201ENST00000606262 256 ntBASIC1.24□□□□□ -2.21
UPK1AO00322 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms