Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 PTGES3P4-201ENST00000426243 356 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC093106.2-201ENST00000428212 385 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC080013.2-201ENST00000460866 323 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 HMGB1P29-201ENST00000505659 499 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC010587.1-201ENST00000505809 469 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC018710.1-201ENST00000506509 158 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC046134.1-201ENST00000514454 666 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 MIR514B-201ENST00000516774 80 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 RNU6-445P-201ENST00000516949 107 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 MIR4782-201ENST00000577987 79 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AL121757.2-201ENST00000611223 313 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.15-201ENST00000611544 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.16-201ENST00000613119 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.12-201ENST00000613778 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.20-201ENST00000613956 192 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.9-201ENST00000615427 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AC063943.3-201ENST00000615562 356 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.11-201ENST00000616345 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.2-201ENST00000616535 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.3-201ENST00000617785 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.19-201ENST00000618602 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 RNU2-1-201ENST00000618664 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.6-201ENST00000619225 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.5-201ENST00000619465 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 U2.10-201ENST00000620268 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AL359697.1-201ENST00000624879 587 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 PISRT1-201ENST00000626175 531 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 MIR3662-201ENST00000637030 95 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC073343.1-201ENST00000328239 651 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 SNORA3A-201ENST00000364113 130 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNA5SP138-201ENST00000365098 114 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNU6-1103P-201ENST00000384150 107 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNU6-190P-201ENST00000384154 102 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNU6-748P-201ENST00000384648 107 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 SNORA40C-201ENST00000391285 128 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 MRPL42P2-201ENST00000403169 426 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNU6-908P-201ENST00000410160 94 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 MTND3P17-201ENST00000416968 344 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC002486.1-201ENST00000435098 391 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 GPM6BP3-201ENST00000442797 145 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC132479.1-201ENST00000449160 144 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.693-201ENST00000516641 110 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 RNU6-572P-201ENST00000516724 80 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC109635.3-201ENST00000529536 185 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 HIF1AP1-201ENST00000553642 175 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AL512360.1-201ENST00000555346 234 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 LINC00933-203ENST00000559812 219 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 MIR1273C-201ENST00000578669 77 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC130324.3-201ENST00000614165 542 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AC009033.1-201ENST00000624279 431 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 MIR1321-201ENST00000637766 79 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 MTND4P1-201ENST00000457501 1466 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 FARSBP1-201ENST00000435808 1778 ntBASIC2.43□□□□□ -2.02
CLIP2Q9UDT6 AL109809.4-201ENST00000603520 2185 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AL359854.1-201ENST00000614203 1594 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 CBX3P1-201ENST00000325243 554 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 SNORD56.2-201ENST00000363242 71 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 SNORA4.3-201ENST00000365564 137 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.529-201ENST00000384586 119 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 EEF1A1P40-201ENST00000412883 573 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 EIF4EP4-201ENST00000424916 578 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 SRIP2-201ENST00000428470 166 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC119618.1-201ENST00000434191 222 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 MTCO3P18-201ENST00000440206 761 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 USP9YP15-201ENST00000442391 422 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 MTND3P10-201ENST00000450967 341 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 PMCHL2-203ENST00000457791 237 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC025033.1-201ENST00000463883 194 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 HMGN1P10-201ENST00000474557 553 ntBASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.42□□□□□ -2.02
CLIP2Q9UDT6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms