Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC112492.4-201ENST00000456549 352 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RNA5SP310-201ENST00000459084 116 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RNU7-169P-201ENST00000459456 61 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC020895.1-201ENST00000595362 272 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AL121655.1-201ENST00000605811 308 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC009318.2-201ENST00000610917 651 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC138305.3-201ENST00000624988 240 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 ZNF299P-201ENST00000406845 1804 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC008669.1-201ENST00000565823 2178 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNA5SP50-201ENST00000363731 107 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNU6-105P-201ENST00000363909 104 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNU6-595P-201ENST00000363944 107 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNA5SP171-201ENST00000391071 115 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RPS29P13-201ENST00000402041 169 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNU6-101P-201ENST00000410323 104 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 CYCSP35-201ENST00000451978 304 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC079354.2-201ENST00000453523 154 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RN7SL293P-201ENST00000481765 281 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNU6-475P-201ENST00000516073 104 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 SNORA43.2-201ENST00000516652 128 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC004584.2-201ENST00000570407 410 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MIR5701-3-201ENST00000578890 82 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MIR5701-1-201ENST00000585138 82 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MTND4LP5-201ENST00000605152 292 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 MIR5701-2-201ENST00000615634 82 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 AC012314.7-201ENST00000619693 93 ntBASIC3.17□□□□□ -1.9
EHD3Q9NZN3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EHD3Q9NZN3 RNU6-942P-201ENST00000363002 107 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.149-201ENST00000363558 117 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.424-201ENST00000384063 103 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 RNU6-505P-201ENST00000384427 107 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 MIR888-201ENST00000401186 77 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC092423.1-201ENST00000430165 186 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 RPL37P4-201ENST00000448908 268 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC114801.2-201ENST00000503825 781 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC110794.1-201ENST00000505816 425 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 RNU6-635P-201ENST00000516651 102 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 SNORA31.18-201ENST00000517043 134 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AP004607.1-201ENST00000524456 203 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AMZ2P1-203ENST00000565833 850 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 MIR5188-201ENST00000583467 113 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 MIR3149-201ENST00000584629 83 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 AC010205.1-201ENST00000616668 449 ntBASIC3.16□□□□□ -1.9
EHD3Q9NZN3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EHD3Q9NZN3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.9
EHD3Q9NZN3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
EHD3Q9NZN3 RNU6-227P-201ENST00000362865 103 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 RNU6-238P-201ENST00000363313 106 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 RNU6-527P-201ENST00000363425 104 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EHD3Q9NZN3 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EHD3Q9NZN3 RPL21P10-201ENST00000463521 490 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 AC010655.3-201ENST00000478818 450 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 RPL23AP49-201ENST00000492925 468 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 RPL22P13-201ENST00000493291 347 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 AC093663.1-201ENST00000497190 394 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 AC006600.1-201ENST00000572529 153 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms