Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 ARL5AP1-201ENST00000418991 388 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 ZNF863P-201ENST00000426746 417 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC233279.1-201ENST00000455300 423 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC011005.2-201ENST00000487324 359 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AC123912.5-201ENST00000605470 343 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AL132765.2-201ENST00000610812 351 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AL031601.2-202ENST00000622650 282 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AL359693.1-201ENST00000614959 2407 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 MTND4P1-201ENST00000457501 1466 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 SNORA67.1-201ENST00000364749 141 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RNU6-395P-201ENST00000365662 106 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RNU6-1179P-201ENST00000384667 107 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 MIR301A-201ENST00000385261 86 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RN7SKP32-201ENST00000410167 303 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL365496.1-201ENST00000426885 215 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 NDUFA5P4-201ENST00000436704 385 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL583843.1-201ENST00000456070 346 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 MTND1P11-201ENST00000456661 876 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RPS15AP34-201ENST00000487776 387 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RPS29P20-201ENST00000489592 171 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 FGF7P4-201ENST00000509595 295 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RNA5SP356-201ENST00000515972 94 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.691-201ENST00000516611 103 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RN7SKP256-201ENST00000517201 314 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC105029.1-201ENST00000520250 669 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 MIR4319-201ENST00000577285 85 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL355877.2-201ENST00000603670 358 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 U2.17-201ENST00000611454 95 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC009233.1-201ENST00000616477 371 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AL359314.1-201ENST00000616913 261 ntBASIC2.72□□□□□ -1.97
UPF2Q9HAU5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPF2Q9HAU5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
UPF2Q9HAU5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC138393.1-203ENST00000327086 343 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.61-201ENST00000362835 102 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.135-201ENST00000363439 95 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.339-201ENST00000365325 102 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 SNORA67.4-201ENST00000384688 142 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 EIF4E2P1-201ENST00000393781 255 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 RNA5SP184-201ENST00000411071 108 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 HMGB1P18-201ENST00000438801 619 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 RPL37P6-201ENST00000460682 294 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 SNORA19.2-201ENST00000516013 114 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 SNORA31.19-201ENST00000517079 126 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC093027.1-201ENST00000546698 429 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC121758.2-201ENST00000553271 193 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC005498.1-201ENST00000592125 465 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 MIR6817-201ENST00000615588 66 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 AC009831.4-201ENST00000620744 325 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 TPTEP1-208ENST00000636884 213 ntBASIC2.71□□□□□ -1.98
UPF2Q9HAU5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UPF2Q9HAU5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU6-797P-201ENST00000363101 109 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 SNORA5B-201ENST00000363786 132 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU6-301P-201ENST00000384277 107 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU6-510P-201ENST00000391239 108 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU4-14P-201ENST00000410858 122 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 RNU2-68P-201ENST00000410878 191 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AC009161.1-201ENST00000417306 376 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.7□□□□□ -1.98
UPF2Q9HAU5 Z82209.1-201ENST00000422141 2135 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 NUP35P1-201ENST00000422734 947 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 AL365400.1-201ENST00000431854 640 ntBASIC2.7□□□□□ -1.98
UPF2Q9HAU5 MTND4LP16-201ENST00000440828 295 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms