Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.08□□□□□ -2.08
DDX47Q9H0S4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
DDX47Q9H0S4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX47Q9H0S4 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 CYCSP27-201ENST00000527643 293 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX47Q9H0S4 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 AC123912.5-201ENST00000605470 343 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 AP001596.2-201ENST00000608410 312 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 ELL2P3-201ENST00000457883 1602 ntBASIC2.08□□□□□ -2.08
DDX47Q9H0S4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 RNA5SP126-201ENST00000365092 109 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 RNU6-434P-201ENST00000384376 107 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 MIR544A-201ENST00000384855 91 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 USP9YP18-201ENST00000425912 695 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC098826.2-201ENST00000452011 651 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AL356010.1-201ENST00000456364 102 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AL122001.1-201ENST00000457027 370 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 SCARNA18-201ENST00000459004 134 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 RN7SKP219-201ENST00000516825 296 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AL356057.1-201ENST00000533798 831 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AP000873.5-201ENST00000533906 236 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC008752.3-201ENST00000588113 712 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC008536.2-201ENST00000607284 349 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 AC091834.1-201ENST00000614543 472 ntBASIC2.07□□□□□ -2.08
DDX47Q9H0S4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 U3.13-201ENST00000364804 214 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 MIR29B2-201ENST00000385055 81 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 SNORA11.2-201ENST00000408318 127 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 RNU2-29P-201ENST00000410423 189 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 SNORD56-201ENST00000413522 71 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 GPM6BP3-201ENST00000442797 145 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC079382.1-201ENST00000493346 557 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 HMGB1P35-201ENST00000503360 598 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC105417.1-201ENST00000514691 285 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 SNORA25.17-201ENST00000517184 124 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 ANP32BP3-201ENST00000559213 706 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 MTCO3P23-201ENST00000561363 289 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC026271.5-201ENST00000577873 130 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AC119751.7-201ENST00000600494 245 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX47Q9H0S4 SNRPGP17-201ENST00000603780 214 ntBASIC2.06□□□□□ -2.08
DDX47Q9H0S4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RNU6-552P-201ENST00000362869 119 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 Y_RNA.480-201ENST00000384364 102 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RNU6-903P-201ENST00000391270 109 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RPS15AP10-201ENST00000432472 382 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 MTCO1P19-201ENST00000443487 500 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RPL32P28-201ENST00000443577 397 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 RNU6-377P-201ENST00000515965 102 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AP001893.2-201ENST00000526949 202 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC018630.3-201ENST00000542637 96 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC026464.5-201ENST00000562497 722 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 MTATP6P3-201ENST00000581686 676 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC110760.3-201ENST00000598794 467 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC002044.1-201ENST00000606707 158 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AC004908.3-201ENST00000610248 625 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AL132822.1-201ENST00000617063 513 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
DDX47Q9H0S4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
DDX47Q9H0S4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms