Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DPPA3P3-201ENST00000603842 430 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 CYP2C61P-201ENST00000604072 290 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC124303.1-201ENST00000605703 360 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 Z82243.1-201ENST00000609432 473 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC010205.1-201ENST00000616668 449 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AL078596.1-201ENST00000624856 447 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC022336.2-201ENST00000568966 2538 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 Y_RNA.31-201ENST00000362574 102 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU6-1287P-201ENST00000362914 107 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU5E-6P-201ENST00000365574 115 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU6-1060P-201ENST00000384664 107 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 MIR548K-201ENST00000408406 116 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU2-36P-201ENST00000410361 191 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU2-47P-201ENST00000410649 186 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU6-516P-201ENST00000411381 104 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU6-1208P-201ENST00000459588 107 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 APOOP3-201ENST00000536787 586 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.74□□□□□ -1.97
SNED1Q8TER0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 AL353997.5-201ENST00000618886 171 ntBASIC2.74□□□□□ -1.97
SNED1Q8TER0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 TPTE2P4-201ENST00000258589 1605 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 MIR21-201ENST00000362134 72 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 SNORD113-7-201ENST00000363762 77 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 RNU6-188P-201ENST00000364207 107 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 SNORD115-7-201ENST00000365306 82 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 Y_RNA.395-201ENST00000383945 109 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 RNU6-463P-201ENST00000384340 107 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 SNORA67.3-201ENST00000384366 140 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 RNU6-370P-201ENST00000411008 104 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 RPL35AP22-201ENST00000436855 335 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 Y_RNA.654-201ENST00000497848 106 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 TRBVA-201ENST00000498804 316 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC021146.2-201ENST00000504736 556 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC104806.1-201ENST00000508720 308 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 RNU6-64P-201ENST00000517119 105 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 AL137161.1-201ENST00000532231 390 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AP000889.2-201ENST00000532684 490 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 MIR4790-201ENST00000577799 79 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 MIR5690-201ENST00000583739 73 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 NUTF2P8-201ENST00000604593 363 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 MIR219B-201ENST00000637023 88 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 AC099654.7-201ENST00000635788 2127 ntBASIC2.73□□□□□ -1.97
SNED1Q8TER0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
SNED1Q8TER0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNED1Q8TER0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 Y_RNA.118-201ENST00000363300 101 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU6-432P-201ENST00000384196 109 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 SNORA24.1-201ENST00000384401 135 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 Y_RNA.576-201ENST00000384781 102 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU6-308P-201ENST00000390957 107 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 FABP5P14-201ENST00000437273 393 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC020550.1-201ENST00000447385 163 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU7-152P-201ENST00000458982 64 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU7-66P-201ENST00000459469 62 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.72□□□□□ -1.97
SNED1Q8TER0 AC135721.1-201ENST00000497954 479 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU6-1046P-201ENST00000516538 107 ntBASIC2.72□□□□□ -1.97
SNED1Q8TER0 RNU6-988P-201ENST00000519081 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms