Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS8Q8N3P4 HAR1A.1-201ENST00000459583 118 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 SNORA3.4-201ENST00000515969 96 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 RNA5SP481-201ENST00000516814 122 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 RNU6-703P-201ENST00000516946 107 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 AC012557.2-201ENST00000605919 418 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 AC107952.2-201ENST00000606048 486 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 AL590240.4-201ENST00000616908 390 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 AC013470.4-201ENST00000619978 986 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 AC009269.6-201ENST00000621778 588 ntBASIC0.06□□□□□ -2.4
VPS8Q8N3P4 RNU6-1274P-201ENST00000384557 107 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 MIR1912-201ENST00000410389 80 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 RNU6-77P-201ENST00000410554 91 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS8Q8N3P4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC099677.2-201ENST00000436385 175 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC010460.2-201ENST00000509054 677 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.05□□□□□ -2.4
VPS8Q8N3P4 RNA5SP337-201ENST00000517007 109 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 BPTFP1-201ENST00000579209 492 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC011451.2-201ENST00000604303 598 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 BNIP3P31-201ENST00000604515 566 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC093913.1-201ENST00000614178 329 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC010133.1-201ENST00000615809 842 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 AC123767.1-202ENST00000620407 817 ntBASIC0.05□□□□□ -2.4
VPS8Q8N3P4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC105758.1-201ENST00000506038 399 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AL353997.4-201ENST00000586196 166 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AL020997.3-201ENST00000602843 359 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC004853.1-201ENST00000604902 698 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC098614.4-201ENST00000607601 462 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC120349.3-201ENST00000624377 529 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 ZNF849P-201ENST00000594711 1566 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 RNU4-79P-201ENST00000362764 141 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AL590556.1-201ENST00000423231 483 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 RPS26P45-201ENST00000471748 340 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC023050.2-201ENST00000544968 387 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC073410.2-201ENST00000603240 332 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC024060.1-201ENST00000607052 494 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 AC130324.3-201ENST00000614165 542 ntBASIC0.04□□□□□ -2.4
VPS8Q8N3P4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
VPS8Q8N3P4 MIR548B-201ENST00000385247 97 ntBASIC0.03□□□□□ -2.41
VPS8Q8N3P4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.03□□□□□ -2.41
VPS8Q8N3P4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS8Q8N3P4 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.41
VPS8Q8N3P4 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS8Q8N3P4 MIR4305-201ENST00000583252 102 ntBASIC0.03□□□□□ -2.41
VPS8Q8N3P4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.02□□□□□ -2.41
VPS8Q8N3P4 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 RNU1-39P-201ENST00000383897 165 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 RNU6-891P-201ENST00000384280 111 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 AL356776.1-201ENST00000406574 447 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 MTCO1P3-201ENST00000429327 192 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 AL606489.2-201ENST00000433886 234 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 RSL24D1P8-201ENST00000434442 492 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 RPS27AP8-201ENST00000452665 445 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 RNU6-528P-201ENST00000516926 100 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.02□□□□□ -2.41
VPS8Q8N3P4 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
VPS8Q8N3P4 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 SNORD114-6-201ENST00000364393 72 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 Y_RNA.471-201ENST00000384312 102 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS8Q8N3P4 MTCYBP1-201ENST00000454315 1119 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS8Q8N3P4 SNORA31.2-201ENST00000516019 134 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 AC090330.1-201ENST00000588646 764 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
VPS8Q8N3P4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS8Q8N3P4 RNU6-105P-201ENST00000363909 104 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 RNU1-119P-201ENST00000391122 165 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0□□□□□ -2.41
VPS8Q8N3P4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0□□□□□ -2.41
VPS8Q8N3P4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0□□□□□ -2.41
VPS8Q8N3P4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0□□□□□ -2.41
VPS8Q8N3P4 MTCO3P17-201ENST00000443775 513 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 OR6C5P-201ENST00000452388 923 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 AC008628.1-201ENST00000508663 265 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0□□□□□ -2.41
VPS8Q8N3P4 AC104417.1-201ENST00000523974 751 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 AC069114.2-201ENST00000604699 304 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 AL162730.1-201ENST00000605734 292 ntBASIC0□□□□□ -2.41
VPS8Q8N3P4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0□□□□□ -2.41
VPS8Q8N3P4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS8Q8N3P4 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.01□□□□□ -2.41
VPS8Q8N3P4 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.01□□□□□ -2.41
VPS8Q8N3P4 RNU6-331P-201ENST00000384724 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms