Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP003973.1-201ENST00000604639 691 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AC095031.1-201ENST00000623685 672 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 RNU6-414P-201ENST00000363705 104 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 MIR140-201ENST00000385282 100 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.47□□□□□ -2.49
VPS13CQ709C8 AL121579.1-201ENST00000555129 305 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 AC084824.4-201ENST00000620106 731 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 AC040168.1-201ENST00000623594 991 ntBASIC-0.47□□□□□ -2.49
VPS13CQ709C8 RNA5SP501-201ENST00000410990 112 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13CQ709C8 RNU7-90P-201ENST00000459216 62 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AC006157.1-201ENST00000611750 366 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 MIR520F-201ENST00000384824 87 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AC025627.3-201ENST00000582078 182 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AC005176.2-201ENST00000596933 147 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 RNU6-163P-201ENST00000384396 106 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13CQ709C8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13CQ709C8 AC078938.1-201ENST00000620993 318 ntBASIC-0.48□□□□□ -2.49
VPS13CQ709C8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC007742.1-201ENST00000425789 329 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 ELOCP26-201ENST00000436067 329 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 SNORD4A-201ENST00000459174 72 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC025423.5-201ENST00000550230 219 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC002400.1-201ENST00000569310 726 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 RPS15AP38-201ENST00000413110 372 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 RAB11AP1-201ENST00000442978 646 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC091860.1-201ENST00000505723 432 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 HMGN1P13-201ENST00000505795 138 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC004062.1-201ENST00000509926 645 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC074344.1-201ENST00000512823 224 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AL022345.1-201ENST00000607292 135 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AL078595.3-201ENST00000623815 1166 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 U6atac.2-201ENST00000408644 118 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MTCO1P20-201ENST00000425366 358 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AL359385.1-201ENST00000456509 365 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 SCARNA18-201ENST00000459004 134 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 RNU6-287P-201ENST00000516230 98 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13CQ709C8 MIR4743-201ENST00000584576 69 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 AC005261.5-201ENST00000596280 355 ntBASIC-0.49□□□□□ -2.49
VPS13CQ709C8 RNU6-858P-201ENST00000362436 107 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 RNU4-7P-201ENST00000364758 141 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 SNX2P2-201ENST00000424553 323 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AL606662.1-201ENST00000445763 553 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 RNU6-420P-201ENST00000458780 107 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC091021.1-201ENST00000468051 388 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC027288.2-201ENST00000553028 243 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC008498.1-201ENST00000613012 531 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 MTND5P33-201ENST00000571250 1450 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 MTATP6P16-201ENST00000434543 526 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 RNU6-863P-201ENST00000515989 104 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC011921.3-201ENST00000605540 361 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 AC117490.2-201ENST00000610042 594 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 7SK.10-201ENST00000621414 298 ntBASIC-0.5□□□□□ -2.49
VPS13CQ709C8 RNY1P7-201ENST00000384743 110 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13CQ709C8 FABP5P4-201ENST00000437203 171 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13CQ709C8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13CQ709C8 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AL390237.1-201ENST00000404226 1415 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 SNORD71-201ENST00000411292 86 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.51□□□□□ -2.49
VPS13CQ709C8 HMGB1P30-201ENST00000492455 606 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 MRPS36P4-201ENST00000534436 298 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 SNRPGP20-201ENST00000604477 205 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC009237.15-201ENST00000610252 501 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC092268.1-201ENST00000342691 405 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 RNU5E-1-201ENST00000362477 120 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms