Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SDR42E1P4-201ENST00000620894 481 ntBASIC3.93□□□□□ -1.78
PMS1P54277 AC022149.2-201ENST00000621061 203 ntBASIC3.93□□□□□ -1.78
PMS1P54277 AL353743.1-202ENST00000431724 1695 ntBASIC3.93□□□□□ -1.78
PMS1P54277 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PMS1P54277 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PMS1P54277 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS1P54277 SNORD9-201ENST00000362566 104 ntBASIC3.92□□□□□ -1.78
PMS1P54277 SNORD115-32-201ENST00000364079 82 ntBASIC3.92□□□□□ -1.78
PMS1P54277 SNORD32A-201ENST00000364805 84 ntBASIC3.92□□□□□ -1.78
PMS1P54277 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS1P54277 SNORA1.3-201ENST00000384676 136 ntBASIC3.92□□□□□ -1.78
PMS1P54277 MIR544A-201ENST00000384855 91 ntBASIC3.92□□□□□ -1.78
PMS1P54277 SNORD78.2-201ENST00000391076 69 ntBASIC3.92□□□□□ -1.78
PMS1P54277 UBA52P6-201ENST00000399822 382 ntBASIC3.92□□□□□ -1.78
PMS1P54277 AL591034.1-201ENST00000407447 340 ntBASIC3.92□□□□□ -1.78
PMS1P54277 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.92□□□□□ -1.78
PMS1P54277 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.92□□□□□ -1.78
PMS1P54277 BX679664.1-201ENST00000434429 253 ntBASIC3.92□□□□□ -1.78
PMS1P54277 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.92□□□□□ -1.78
PMS1P54277 AC007969.2-201ENST00000441891 191 ntBASIC3.92□□□□□ -1.78
PMS1P54277 HMGN2P10-201ENST00000448085 265 ntBASIC3.92□□□□□ -1.78
PMS1P54277 MTND4LP30-201ENST00000454092 297 ntBASIC3.92□□□□□ -1.78
PMS1P54277 AC087477.1-201ENST00000465747 340 ntBASIC3.92□□□□□ -1.78
PMS1P54277 HMGB1P35-201ENST00000503360 598 ntBASIC3.92□□□□□ -1.78
PMS1P54277 IGKV2-23-201ENST00000518729 323 ntBASIC3.92□□□□□ -1.78
PMS1P54277 AL391261.3-201ENST00000557194 520 ntBASIC3.92□□□□□ -1.78
PMS1P54277 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS1P54277 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS1P54277 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PMS1P54277 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PMS1P54277 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS1P54277 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 SNORA29-201ENST00000384183 140 ntBASIC3.91□□□□□ -1.78
PMS1P54277 RNU6-843P-201ENST00000384454 104 ntBASIC3.91□□□□□ -1.78
PMS1P54277 RNU6-1026P-201ENST00000384465 108 ntBASIC3.91□□□□□ -1.78
PMS1P54277 Y_RNA.504-201ENST00000384481 104 ntBASIC3.91□□□□□ -1.78
PMS1P54277 Y_RNA.518-201ENST00000384552 113 ntBASIC3.91□□□□□ -1.78
PMS1P54277 MIR153-2-201ENST00000385225 87 ntBASIC3.91□□□□□ -1.78
PMS1P54277 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PMS1P54277 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.91□□□□□ -1.78
PMS1P54277 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS1P54277 BPY2DP-201ENST00000422208 265 ntBASIC3.91□□□□□ -1.78
PMS1P54277 RPL23AP95-201ENST00000426806 265 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS1P54277 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS1P54277 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.91□□□□□ -1.78
PMS1P54277 MED28P2-201ENST00000475771 317 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AF186996.7-201ENST00000492781 209 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS1P54277 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS1P54277 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 AC007375.1-201ENST00000554513 578 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AC021739.1-201ENST00000559631 174 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS1P54277 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
PMS1P54277 AC009163.5-201ENST00000575421 637 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AC141273.2-201ENST00000618989 130 ntBASIC3.91□□□□□ -1.78
PMS1P54277 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS1P54277 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS1P54277 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
PMS1P54277 AC110491.1-201ENST00000562191 2010 ntBASIC3.9□□□□□ -1.78
PMS1P54277 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.9□□□□□ -1.78
PMS1P54277 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PMS1P54277 Y_RNA.84-201ENST00000363011 104 ntBASIC3.9□□□□□ -1.79
PMS1P54277 Y_RNA.143-201ENST00000363520 106 ntBASIC3.9□□□□□ -1.79
PMS1P54277 Y_RNA.478-201ENST00000384358 107 ntBASIC3.9□□□□□ -1.79
PMS1P54277 Y_RNA.515-201ENST00000384535 112 ntBASIC3.9□□□□□ -1.79
PMS1P54277 RNU6-1203P-201ENST00000410703 110 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AL445584.1-201ENST00000431451 330 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.9□□□□□ -1.79
PMS1P54277 AC026784.1-201ENST00000507986 352 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.9□□□□□ -1.79
PMS1P54277 MTND1P19-201ENST00000511780 315 ntBASIC3.9□□□□□ -1.79
PMS1P54277 Y_RNA.673-201ENST00000516306 88 ntBASIC3.9□□□□□ -1.79
PMS1P54277 SNORA31.23-201ENST00000517219 133 ntBASIC3.9□□□□□ -1.79
PMS1P54277 NDUFB9P3-201ENST00000521269 501 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.9□□□□□ -1.79
PMS1P54277 HSPE1P4-201ENST00000550617 308 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.9□□□□□ -1.79
PMS1P54277 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.9□□□□□ -1.79
PMS1P54277 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.9□□□□□ -1.79
PMS1P54277 MIR4300-201ENST00000581016 96 ntBASIC3.9□□□□□ -1.79
PMS1P54277 MIR4697-201ENST00000582977 78 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AC012433.1-201ENST00000588916 398 ntBASIC3.9□□□□□ -1.79
PMS1P54277 VN1R85P-201ENST00000601587 426 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AC240442.1-201ENST00000616055 283 ntBASIC3.9□□□□□ -1.79
PMS1P54277 U4.6-201ENST00000621618 127 ntBASIC3.9□□□□□ -1.79
PMS1P54277 AF117829.1-206ENST00000621883 3802 ntBASIC3.9□□□□□ -1.79
PMS1P54277 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.9□□□□□ -1.79
PMS1P54277 MIR3529-201ENST00000637713 78 ntBASIC3.9□□□□□ -1.79
PMS1P54277 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PMS1P54277 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PMS1P54277 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PMS1P54277 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.9□□□□□ -1.79
PMS1P54277 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms