Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL353621.1-201ENST00000418219 243 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 PGBD4P6-201ENST00000421501 610 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 MTCO3P5-201ENST00000433620 714 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL12P48061 MTND1P26-201ENST00000440488 538 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 CALM1P1-201ENST00000442082 433 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.61□□□□□ -2.15
CXCL12P48061 NDUFB1P2-201ENST00000449477 176 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 MED28P2-201ENST00000475771 317 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL12P48061 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL12P48061 RNU6-685P-201ENST00000517088 95 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.61□□□□□ -2.15
CXCL12P48061 OR5AL2P-201ENST00000532185 920 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AC007229.1-201ENST00000590455 412 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AL096840.1-201ENST00000603287 93 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AL138889.2-201ENST00000603883 242 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AC064872.1-201ENST00000604823 1072 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AL138963.2-201ENST00000605137 226 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.61□□□□□ -2.15
CXCL12P48061 RBBP8P1-201ENST00000449447 1844 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CXCL12P48061 AC138393.1-203ENST00000327086 343 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CXCL12P48061 POLHP1-201ENST00000411806 470 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL12P48061 MTCYBP5-201ENST00000423752 1135 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL12P48061 AL031667.1-201ENST00000440222 725 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 MTCO2P6-201ENST00000463134 685 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 HMGN1P7-201ENST00000491722 313 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AC018437.1-201ENST00000492214 406 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AC098862.1-201ENST00000504991 413 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AC104806.1-201ENST00000508720 308 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AF213884.2-201ENST00000510417 903 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 RNU1-86P-201ENST00000516108 154 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 Y_RNA.687-201ENST00000516558 91 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 RNU1-107P-201ENST00000516617 154 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.6□□□□□ -2.15
CXCL12P48061 AP002453.2-201ENST00000533503 320 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL161670.1-201ENST00000554348 137 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL133241.1-201ENST00000556832 487 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 AC015720.1-201ENST00000565251 277 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
CXCL12P48061 AC138649.3-201ENST00000622154 254 ntBASIC1.6□□□□□ -2.15
CXCL12P48061 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.6□□□□□ -2.15
CXCL12P48061 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CXCL12P48061 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CXCL12P48061 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CXCL12P48061 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.59□□□□□ -2.15
CXCL12P48061 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
CXCL12P48061 Y_RNA.191-201ENST00000363972 113 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 Y_RNA.201-201ENST00000364052 96 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 SNORA62.1-201ENST00000364287 154 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU4-91P-201ENST00000364778 135 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-282P-201ENST00000365357 103 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-116P-201ENST00000384042 109 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-74P-201ENST00000384235 107 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MIR1-2-201ENST00000384961 85 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MIR1302-8-201ENST00000408342 128 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-174P-201ENST00000410406 106 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 C1DP2-201ENST00000418167 426 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.59□□□□□ -2.15
CXCL12P48061 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 GPR143P-201ENST00000434155 205 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC244505.5-201ENST00000443639 207 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MTND2P4-201ENST00000445034 1004 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AL162395.1-201ENST00000457882 422 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 HMGB1P30-201ENST00000492455 606 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 MRPS17P9-201ENST00000511924 393 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC091965.2-201ENST00000512324 613 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MTCO3P28-201ENST00000513351 515 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-410P-201ENST00000517006 107 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 AC007834.2-201ENST00000536310 343 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 MIR3913-1-201ENST00000577744 102 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MIR4421-201ENST00000578133 69 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 MIR4287-201ENST00000579398 78 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC073539.2-201ENST00000597113 165 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 BNIP3P30-201ENST00000601184 574 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 Z84480.1-201ENST00000605131 311 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RNU6-91P-201ENST00000607774 107 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 AC093788.1-201ENST00000609356 927 ntBASIC1.59□□□□□ -2.15
CXCL12P48061 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms