Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FAM91A3P-201ENST00000456826 2544 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.25□□□□□ -1.73
CHRNA4P43681 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHRNA4P43681 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA4P43681 Y_RNA.24-201ENST00000362508 103 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 RNU1-108P-201ENST00000362556 161 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 Y_RNA.293-201ENST00000364908 93 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 RNA5SP44-201ENST00000410446 133 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA4P43681 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA4P43681 NDUFS5P3-201ENST00000450668 321 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 AC136628.3-201ENST00000521868 290 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 IFITM8P-201ENST00000522529 394 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.24□□□□□ -1.73
CHRNA4P43681 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.24□□□□□ -1.73
CHRNA4P43681 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 FAM27D1-201ENST00000612308 341 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA4P43681 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CHRNA4P43681 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.24□□□□□ -1.73
CHRNA4P43681 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA4P43681 Z82217.1-201ENST00000625157 8149 ntBASIC4.24□□□□□ -1.73
CHRNA4P43681 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA4P43681 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CHRNA4P43681 AL592437.2-201ENST00000421655 2434 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA4P43681 AL596211.1-201ENST00000569873 2277 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNU5F-3P-201ENST00000363767 117 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNU6-873P-201ENST00000363833 107 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNA5SP366-201ENST00000365454 123 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNU6-1310P-201ENST00000384153 107 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNU6-106P-201ENST00000384405 107 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 RNU6-19P-201ENST00000384718 107 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 AL355497.1-201ENST00000406262 551 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 MIR1179-201ENST00000408703 91 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 CYCSP10-201ENST00000417973 294 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 AL135790.2-201ENST00000437701 267 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 AC245047.8-201ENST00000456455 284 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA4P43681 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA4P43681 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA4P43681 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA4P43681 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA4P43681 AC022655.2-201ENST00000577280 318 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 MIR3138-201ENST00000585238 82 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 AC005255.1-201ENST00000593748 216 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 SNORA43.4-201ENST00000629559 138 ntBASIC4.23□□□□□ -1.73
CHRNA4P43681 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA4P43681 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CHRNA4P43681 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA4P43681 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA4P43681 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA4P43681 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA4P43681 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA4P43681 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA4P43681 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CHRNA4P43681 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA4P43681 AC010329.5-201ENST00000623497 2174 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 Y_RNA.287-201ENST00000364853 94 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RNA5SP173-201ENST00000364857 136 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 SNORD58C-201ENST00000365223 64 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RNU6-142P-201ENST00000384019 107 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RNU6-72P-201ENST00000384285 79 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 Y_RNA.498-201ENST00000384460 102 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 MIR526A2-201ENST00000390198 65 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 MIR708-201ENST00000390708 88 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 MIR1250-201ENST00000408098 113 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC112220.1-201ENST00000434628 355 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA4P43681 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA4P43681 AC109327.1-201ENST00000471666 403 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RPL30P12-201ENST00000474666 353 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 HSPE1P6-201ENST00000479457 291 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RPS4XP13-201ENST00000483219 789 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 RPL31P13-201ENST00000484151 370 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA4P43681 Y_RNA.692-201ENST00000516627 105 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC134698.5-201ENST00000519444 336 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC022790.1-201ENST00000522872 204 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA4P43681 ARF4P1-201ENST00000605447 541 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AL121890.5-201ENST00000620848 304 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC027309.3-201ENST00000623419 351 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 AC012640.5-201ENST00000623897 319 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA4P43681 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CHRNA4P43681 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.22□□□□□ -1.73
CHRNA4P43681 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
CHRNA4P43681 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHRNA4P43681 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms