Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL732372.2-207ENST00000445840 183 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 SEPT14P2-201ENST00000453405 183 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC023194.1-201ENST00000493084 308 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.76□□□□□ -1.97
HOXC13P31276 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.76□□□□□ -1.97
HOXC13P31276 SEPT14P4-201ENST00000513445 186 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC112206.3-201ENST00000514578 389 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 RNA5SP401-201ENST00000515920 127 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 RNA5SP282-201ENST00000516355 108 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC009902.1-201ENST00000519351 183 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 FO082796.1-201ENST00000523795 183 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC022616.3-201ENST00000523940 148 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC093249.1-201ENST00000567049 203 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXC13P31276 AC008737.2-201ENST00000599446 118 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC007938.3-201ENST00000604965 623 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AL355802.3-201ENST00000607571 545 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AC024940.5-201ENST00000622889 474 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 MIR6733-201ENST00000635723 61 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 AP006437.1-201ENST00000641440 3685 ntBASIC2.76□□□□□ -1.97
HOXC13P31276 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.76□□□□□ -1.97
HOXC13P31276 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC13P31276 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC13P31276 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC13P31276 CKAP2P1-201ENST00000555477 2049 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AL139276.1-201ENST00000311910 1001 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 Y_RNA.33-201ENST00000362591 102 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 Y_RNA.157-201ENST00000363638 102 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 RNU6-1160P-201ENST00000384546 104 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 MIR559-201ENST00000385188 96 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 MIR548P-201ENST00000408336 84 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 RN7SKP32-201ENST00000410167 303 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC13P31276 EIF4EP4-201ENST00000424916 578 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AL606489.2-201ENST00000433886 234 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 IPO7P1-201ENST00000442031 636 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC13P31276 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC13P31276 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 SNORA19.2-201ENST00000516013 114 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 RNU6-835P-201ENST00000516974 104 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC107953.1-201ENST00000522216 297 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC13P31276 AC023050.3-201ENST00000541142 333 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AL157871.3-201ENST00000557231 293 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC13P31276 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC13P31276 AC105245.1-201ENST00000581934 244 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 MIR4769-201ENST00000584126 77 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC091152.3-201ENST00000604227 325 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC113139.1-201ENST00000605049 239 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC124303.1-201ENST00000605703 360 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC13P31276 AC009248.2-201ENST00000619826 254 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC090971.5-201ENST00000621102 293 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC064859.1-201ENST00000624741 174 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 AC134503.1-201ENST00000633048 54 ntBASIC2.75□□□□□ -1.97
HOXC13P31276 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC13P31276 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC13P31276 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HOXC13P31276 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC13P31276 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXC13P31276 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HOXC13P31276 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
HOXC13P31276 MIR369-201ENST00000362155 70 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNU6-1280P-201ENST00000365211 107 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 SNORA69-201ENST00000383895 132 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNU6-474P-201ENST00000384243 107 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 MIR218-1-201ENST00000384999 110 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 Y_RNA.579-201ENST00000390939 94 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXC13P31276 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC13P31276 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC13P31276 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC13P31276 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC13P31276 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC13P31276 AC108078.2-201ENST00000510750 236 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNA5SP24-201ENST00000516478 95 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNU6-1046P-201ENST00000516538 107 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 RNA5SP82-201ENST00000516707 92 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 SNORA31.19-201ENST00000517079 126 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC13P31276 OR4R1P-201ENST00000529879 463 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC005668.1-201ENST00000571142 476 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC13P31276 MIR3668-201ENST00000582138 75 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC090425.1-201ENST00000610007 140 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 uc_338.5-201ENST00000611839 155 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 DISC2.1-201ENST00000612827 205 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC245884.12-201ENST00000615364 59 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 AC092608.2-201ENST00000624427 218 ntBASIC2.74□□□□□ -1.97
HOXC13P31276 MTND5P16-201ENST00000460269 1703 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC13P31276 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC13P31276 Y_RNA.184-201ENST00000363884 108 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms