Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MTND3P23-201ENST00000431980 347 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC8P31273 IFNA20P-201ENST00000436840 528 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 FABP5P14-201ENST00000437273 393 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC8P31273 GTF2IP13-201ENST00000438487 386 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC093019.1-201ENST00000443135 252 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC010095.1-201ENST00000443543 144 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC012308.1-201ENST00000451232 178 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC8P31273 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC8P31273 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC8P31273 AC116655.1-201ENST00000508324 901 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 RNU2-69P-201ENST00000516061 100 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 RNU7-30P-201ENST00000516835 62 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC8P31273 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC8P31273 AP000763.2-201ENST00000540641 163 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 RAB11AP2-201ENST00000545905 639 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC8P31273 OR11H5P-201ENST00000554039 926 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 SCOCP1-201ENST00000554676 349 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 FGF7P1-201ENST00000582820 288 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 BNIP3P25-201ENST00000596023 559 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC012119.1-201ENST00000603184 222 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 AC107871.2-201ENST00000612894 502 ntBASIC2.72□□□□□ -1.97
HOXC8P31273 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC8P31273 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC8P31273 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC8P31273 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXC8P31273 RNU6-1252P-201ENST00000363054 104 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 Y_RNA.142-201ENST00000363491 102 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 SNORD81.2-201ENST00000365153 76 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 Y_RNA.356-201ENST00000365475 113 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 RNU6-898P-201ENST00000365627 104 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 RNU6-831P-201ENST00000384548 107 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 MIR578-201ENST00000384828 96 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 SNORA40C-201ENST00000391285 128 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 RPL21P90-201ENST00000415692 466 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC8P31273 MTCO3P46-201ENST00000425787 232 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AL356320.1-201ENST00000429616 163 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC8P31273 MTND1P11-201ENST00000456661 876 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 DYNLL1P5-201ENST00000467158 270 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC8P31273 AC023141.11-201ENST00000508864 202 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 FAM206BP-201ENST00000510179 541 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 RNU6-189P-201ENST00000516120 101 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AC087241.2-201ENST00000535801 324 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 MIR3199-1-201ENST00000582434 88 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 MIR548AC-201ENST00000585049 88 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 VN1R80P-201ENST00000597126 338 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 Z82243.1-201ENST00000609432 473 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 U2.17-201ENST00000611454 95 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AL359314.1-201ENST00000616913 261 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 AC099654.5-201ENST00000636479 350 ntBASIC2.71□□□□□ -1.98
HOXC8P31273 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC8P31273 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC8P31273 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC8P31273 AL359854.1-201ENST00000614203 1594 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC8P31273 MIR412-201ENST00000362142 91 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 Y_RNA.100-201ENST00000363141 102 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 U8.2-201ENST00000363156 134 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-82P-201ENST00000363970 107 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 Y_RNA.263-201ENST00000364659 114 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-1303P-201ENST00000364841 107 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-434P-201ENST00000384376 107 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-748P-201ENST00000384648 107 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 MIR218-1-201ENST00000384999 110 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-510P-201ENST00000391239 108 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AL356432.1-201ENST00000405809 419 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AL135786.1-201ENST00000415892 214 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC8P31273 Z98742.2-201ENST00000431564 187 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC8P31273 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC8P31273 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC8P31273 snoU13.15-201ENST00000459407 104 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AC008571.1-201ENST00000467232 300 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RPL23AP45-201ENST00000476406 468 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AC103851.1-201ENST00000506833 274 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC8P31273 RNU6-273P-201ENST00000516937 96 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 RN7SKP256-201ENST00000517201 314 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC8P31273 AC026464.5-201ENST00000562497 722 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 MIR4742-201ENST00000581069 85 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC8P31273 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
HOXC8P31273 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms