Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMNB1P20700 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LMNB1P20700 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMNB1P20700 RNU6-942P-201ENST00000363002 107 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 RNA5SP126-201ENST00000365092 109 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 RNU6-611P-201ENST00000384276 104 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 Y_RNA.518-201ENST00000384552 113 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 Y_RNA.562-201ENST00000384695 113 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMNB1P20700 U3.37-201ENST00000408528 213 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 YPEL5P1-201ENST00000419731 367 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMNB1P20700 Z75741.1-201ENST00000446793 314 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.33□□□□□ -1.72
LMNB1P20700 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.33□□□□□ -1.72
LMNB1P20700 AC025465.3-201ENST00000510570 311 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
LMNB1P20700 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.33□□□□□ -1.72
LMNB1P20700 AC104581.2-201ENST00000572227 430 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 MIR4644-201ENST00000579929 84 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 AC241585.2-209ENST00000638217 143 ntBASIC4.33□□□□□ -1.72
LMNB1P20700 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMNB1P20700 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMNB1P20700 IPO8P1-201ENST00000455509 3109 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMNB1P20700 Y_RNA.458-201ENST00000384240 102 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AP000275.1-201ENST00000411943 390 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.32□□□□□ -1.72
LMNB1P20700 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.32□□□□□ -1.72
LMNB1P20700 RN7SKP210-201ENST00000459176 261 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.32□□□□□ -1.72
LMNB1P20700 IGKV2-26-201ENST00000518305 343 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.32□□□□□ -1.72
LMNB1P20700 AC010928.2-201ENST00000588017 287 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 AC006023.1-201ENST00000603944 259 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 Z75746.1-201ENST00000440243 2080 ntBASIC4.32□□□□□ -1.72
LMNB1P20700 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.32□□□□□ -1.72
LMNB1P20700 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.31□□□□□ -1.72
LMNB1P20700 SRP72P2-201ENST00000344851 1979 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 RNU6-50P-201ENST00000362356 103 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 RNU1-76P-201ENST00000362903 159 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 Y_RNA.183-201ENST00000363882 113 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 RPL21P75-201ENST00000396599 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 RPL21P28-201ENST00000401418 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AL590556.1-201ENST00000423231 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.31□□□□□ -1.72
LMNB1P20700 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.31□□□□□ -1.72
LMNB1P20700 RNU7-170P-201ENST00000459303 61 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 RPL21P39-201ENST00000463605 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC087190.1-201ENST00000484462 480 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC107032.1-201ENST00000485945 480 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC132942.1-201ENST00000486753 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC093591.1-201ENST00000491435 481 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 RPL21P16-201ENST00000495531 483 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC091874.1-201ENST00000511402 339 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.31□□□□□ -1.72
LMNB1P20700 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.31□□□□□ -1.72
LMNB1P20700 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.31□□□□□ -1.72
LMNB1P20700 AC020895.1-201ENST00000595362 272 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC073410.2-201ENST00000603240 332 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.31□□□□□ -1.72
LMNB1P20700 AP003355.3-201ENST00000623465 114 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LMNB1P20700 U6.92-201ENST00000636464 89 ntBASIC4.31□□□□□ -1.72
LMNB1P20700 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
LMNB1P20700 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.31□□□□□ -1.72
LMNB1P20700 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.31□□□□□ -1.72
LMNB1P20700 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.31□□□□□ -1.72
LMNB1P20700 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMNB1P20700 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LMNB1P20700 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.3□□□□□ -1.72
LMNB1P20700 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.3□□□□□ -1.72
LMNB1P20700 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMNB1P20700 Y_RNA.27-201ENST00000362540 103 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 MIR215-201ENST00000384858 110 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AL358453.1-201ENST00000422522 250 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AL031659.1-201ENST00000447075 539 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 RNU7-87P-201ENST00000459343 62 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 TOMM22P6-201ENST00000465035 409 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.3□□□□□ -1.72
LMNB1P20700 AC067942.3-201ENST00000512025 362 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.3□□□□□ -1.72
LMNB1P20700 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.3□□□□□ -1.72
LMNB1P20700 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.3□□□□□ -1.72
LMNB1P20700 AC007375.1-201ENST00000554513 578 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 LINC00933-203ENST00000559812 219 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AC012433.1-201ENST00000588916 398 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AL109918.3-201ENST00000603072 338 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 AC024153.1-201ENST00000603103 365 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 RPL12P50-201ENST00000603116 116 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 MIR7106-201ENST00000612419 65 ntBASIC4.3□□□□□ -1.72
LMNB1P20700 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 520 ms