Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.39□□□□□ -2.19
CD28P10747 MRPS17P9-201ENST00000511924 393 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC107393.1-201ENST00000512403 346 ntBASIC1.39□□□□□ -2.19
CD28P10747 RNU6-250P-201ENST00000516958 103 ntBASIC1.39□□□□□ -2.19
CD28P10747 RNU6-667P-201ENST00000517186 102 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.39□□□□□ -2.19
CD28P10747 AP000763.2-201ENST00000540641 163 ntBASIC1.39□□□□□ -2.19
CD28P10747 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.39□□□□□ -2.19
CD28P10747 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.39□□□□□ -2.19
CD28P10747 AC026271.5-201ENST00000577873 130 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.39□□□□□ -2.19
CD28P10747 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.39□□□□□ -2.19
CD28P10747 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.39□□□□□ -2.19
CD28P10747 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL603755.1-201ENST00000619504 163 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC011155.2-201ENST00000623202 216 ntBASIC1.39□□□□□ -2.19
CD28P10747 Z69720.2-201ENST00000624755 279 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC008993.2-201ENST00000631744 806 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.39□□□□□ -2.19
CD28P10747 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.39□□□□□ -2.19
CD28P10747 FGF7P2-201ENST00000332473 296 ntBASIC1.38□□□□□ -2.19
CD28P10747 RNU6-1097P-201ENST00000363586 107 ntBASIC1.38□□□□□ -2.19
CD28P10747 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.38□□□□□ -2.19
CD28P10747 RNU6-297P-201ENST00000384636 107 ntBASIC1.38□□□□□ -2.19
CD28P10747 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CD28P10747 MIR1283-2-201ENST00000408621 87 ntBASIC1.38□□□□□ -2.19
CD28P10747 RPL23AP36-201ENST00000413895 458 ntBASIC1.38□□□□□ -2.19
CD28P10747 PGBD4P6-201ENST00000421501 610 ntBASIC1.38□□□□□ -2.19
CD28P10747 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.38□□□□□ -2.19
CD28P10747 AL645568.3-201ENST00000433683 316 ntBASIC1.38□□□□□ -2.19
CD28P10747 HMGB1P31-201ENST00000437242 427 ntBASIC1.38□□□□□ -2.19
CD28P10747 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.38□□□□□ -2.19
CD28P10747 AL353689.1-201ENST00000438895 199 ntBASIC1.38□□□□□ -2.19
CD28P10747 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.38□□□□□ -2.19
CD28P10747 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CD28P10747 AC012308.1-201ENST00000451232 178 ntBASIC1.38□□□□□ -2.19
CD28P10747 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.38□□□□□ -2.19
CD28P10747 AL033528.1-201ENST00000453780 140 ntBASIC1.38□□□□□ -2.19
CD28P10747 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 MTND3P25-201ENST00000509243 135 ntBASIC1.38□□□□□ -2.19
CD28P10747 AC104136.1-201ENST00000512969 394 ntBASIC1.38□□□□□ -2.19
CD28P10747 AC108729.3-201ENST00000513484 108 ntBASIC1.38□□□□□ -2.19
CD28P10747 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.38□□□□□ -2.19
CD28P10747 AC022616.8-201ENST00000533569 253 ntBASIC1.38□□□□□ -2.19
CD28P10747 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 MIR3683-201ENST00000580847 82 ntBASIC1.38□□□□□ -2.19
CD28P10747 MIR4775-201ENST00000581168 75 ntBASIC1.38□□□□□ -2.19
CD28P10747 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.38□□□□□ -2.19
CD28P10747 AC012493.3-201ENST00000604494 112 ntBASIC1.38□□□□□ -2.19
CD28P10747 Z99289.3-201ENST00000605586 594 ntBASIC1.38□□□□□ -2.19
CD28P10747 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CD28P10747 AC026585.1-201ENST00000619582 524 ntBASIC1.38□□□□□ -2.19
CD28P10747 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.38□□□□□ -2.19
CD28P10747 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.38□□□□□ -2.19
CD28P10747 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.38□□□□□ -2.19
CD28P10747 Y_RNA.164-201ENST00000363709 102 ntBASIC1.37□□□□□ -2.19
CD28P10747 RNY4P34-201ENST00000364779 95 ntBASIC1.37□□□□□ -2.19
CD28P10747 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CD28P10747 MIR29B2-201ENST00000385055 81 ntBASIC1.37□□□□□ -2.19
CD28P10747 RNU6-550P-201ENST00000391057 101 ntBASIC1.37□□□□□ -2.19
CD28P10747 RNA5SP489-201ENST00000410986 109 ntBASIC1.37□□□□□ -2.19
CD28P10747 RNA5SP111-201ENST00000411386 101 ntBASIC1.37□□□□□ -2.19
CD28P10747 AL158823.1-201ENST00000418441 478 ntBASIC1.37□□□□□ -2.19
CD28P10747 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AL669831.1-202ENST00000428504 417 ntBASIC1.37□□□□□ -2.19
CD28P10747 GTF2IP13-201ENST00000438487 386 ntBASIC1.37□□□□□ -2.19
CD28P10747 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.37□□□□□ -2.19
CD28P10747 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.37□□□□□ -2.19
CD28P10747 AL353752.1-201ENST00000454946 260 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 RNA5SP269-201ENST00000459032 137 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC006512.1-201ENST00000468816 291 ntBASIC1.37□□□□□ -2.19
CD28P10747 RPL30P1-201ENST00000488676 339 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.37□□□□□ -2.19
CD28P10747 AC104806.1-201ENST00000508720 308 ntBASIC1.37□□□□□ -2.19
CD28P10747 Y_RNA.676-201ENST00000516393 96 ntBASIC1.37□□□□□ -2.19
CD28P10747 RNU2-44P-201ENST00000516795 194 ntBASIC1.37□□□□□ -2.19
CD28P10747 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.37□□□□□ -2.19
CD28P10747 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.37□□□□□ -2.19
CD28P10747 AC091135.1-201ENST00000585943 307 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC098848.2-201ENST00000588023 330 ntBASIC1.37□□□□□ -2.19
CD28P10747 VN1R80P-201ENST00000597126 338 ntBASIC1.37□□□□□ -2.19
CD28P10747 AL078605.1-201ENST00000603529 500 ntBASIC1.37□□□□□ -2.19
CD28P10747 AL670379.4-201ENST00000605279 254 ntBASIC1.37□□□□□ -2.19
CD28P10747 MIR502-201ENST00000606349 86 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC008250.2-201ENST00000615261 205 ntBASIC1.37□□□□□ -2.19
CD28P10747 AC007792.1-201ENST00000623023 402 ntBASIC1.37□□□□□ -2.19
CD28P10747 U4.7-201ENST00000638126 106 ntBASIC1.37□□□□□ -2.19
CD28P10747 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.37□□□□□ -2.19
CD28P10747 RNU6-45P-201ENST00000384471 107 ntBASIC1.36□□□□□ -2.19
CD28P10747 MIR29C-201ENST00000385231 88 ntBASIC1.36□□□□□ -2.19
CD28P10747 SNORA40.3-201ENST00000390964 122 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms