Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IMMP1LP2-201ENST00000552954 492 ntBASIC1.84□□□□□ -2.11
P04436 MIR5692A1-201ENST00000580523 69 ntBASIC1.84□□□□□ -2.11
P04436 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.84□□□□□ -2.11
P04436 AC009314.1-201ENST00000603871 304 ntBASIC1.84□□□□□ -2.11
P04436 uc_338.15-201ENST00000615470 191 ntBASIC1.84□□□□□ -2.11
P04436 SCARNA4-202ENST00000625402 129 ntBASIC1.84□□□□□ -2.11
P04436 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
P04436 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
P04436 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.84□□□□□ -2.12
P04436 AC002543.1-201ENST00000299783 1954 ntBASIC1.83□□□□□ -2.12
P04436 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.83□□□□□ -2.12
P04436 RNU6-78P-201ENST00000362897 107 ntBASIC1.83□□□□□ -2.12
P04436 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
P04436 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
P04436 SNORA40.19-201ENST00000390846 128 ntBASIC1.83□□□□□ -2.12
P04436 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
P04436 UBE2V1P10-201ENST00000414685 269 ntBASIC1.83□□□□□ -2.12
P04436 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
P04436 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.83□□□□□ -2.12
P04436 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.83□□□□□ -2.12
P04436 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.83□□□□□ -2.12
P04436 USP9YP8-201ENST00000441913 500 ntBASIC1.83□□□□□ -2.12
P04436 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
P04436 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.83□□□□□ -2.12
P04436 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.83□□□□□ -2.12
P04436 FDX1P2-201ENST00000450769 375 ntBASIC1.83□□□□□ -2.12
P04436 AC012308.1-201ENST00000451232 178 ntBASIC1.83□□□□□ -2.12
P04436 AC006026.2-201ENST00000457376 180 ntBASIC1.83□□□□□ -2.12
P04436 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
P04436 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.83□□□□□ -2.12
P04436 SNORA4.4-201ENST00000515921 135 ntBASIC1.83□□□□□ -2.12
P04436 RNU2-53P-201ENST00000516257 147 ntBASIC1.83□□□□□ -2.12
P04436 RNU6-586P-201ENST00000517265 104 ntBASIC1.83□□□□□ -2.12
P04436 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
P04436 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.83□□□□□ -2.12
P04436 MIR5583-1-201ENST00000580941 59 ntBASIC1.83□□□□□ -2.12
P04436 MTATP6P3-201ENST00000581686 676 ntBASIC1.83□□□□□ -2.12
P04436 AC090897.2-201ENST00000581715 130 ntBASIC1.83□□□□□ -2.12
P04436 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
P04436 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.83□□□□□ -2.12
P04436 AC068790.2-201ENST00000602601 557 ntBASIC1.83□□□□□ -2.12
P04436 AL031601.2-202ENST00000622650 282 ntBASIC1.83□□□□□ -2.12
P04436 Z69720.2-201ENST00000624755 279 ntBASIC1.83□□□□□ -2.12
P04436 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.83□□□□□ -2.12
P04436 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
P04436 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
P04436 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
P04436 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
P04436 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.82□□□□□ -2.12
P04436 Y_RNA.51-201ENST00000362725 102 ntBASIC1.82□□□□□ -2.12
P04436 RNU6-1120P-201ENST00000362988 108 ntBASIC1.82□□□□□ -2.12
P04436 RNU1-23P-201ENST00000363361 144 ntBASIC1.82□□□□□ -2.12
P04436 Y_RNA.381-201ENST00000365666 102 ntBASIC1.82□□□□□ -2.12
P04436 SNORD116-2-201ENST00000384274 95 ntBASIC1.82□□□□□ -2.12
P04436 RNU6-1119P-201ENST00000384349 108 ntBASIC1.82□□□□□ -2.12
P04436 SNORD116-6-201ENST00000384711 96 ntBASIC1.82□□□□□ -2.12
P04436 SNORA46.1-201ENST00000391069 153 ntBASIC1.82□□□□□ -2.12
P04436 RNU6-903P-201ENST00000391270 109 ntBASIC1.82□□□□□ -2.12
P04436 RNA5SP390-201ENST00000410191 113 ntBASIC1.82□□□□□ -2.12
P04436 RNU4-46P-201ENST00000410818 138 ntBASIC1.82□□□□□ -2.12
P04436 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.82□□□□□ -2.12
P04436 WARS2P1-201ENST00000429678 537 ntBASIC1.82□□□□□ -2.12
P04436 HMGB1P31-201ENST00000437242 427 ntBASIC1.82□□□□□ -2.12
P04436 AL356010.1-201ENST00000456364 102 ntBASIC1.82□□□□□ -2.12
P04436 AC022364.2-201ENST00000457963 554 ntBASIC1.82□□□□□ -2.12
P04436 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
P04436 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
P04436 RPL21P99-201ENST00000480369 423 ntBASIC1.82□□□□□ -2.12
P04436 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.82□□□□□ -2.12
P04436 AC108078.1-201ENST00000508073 725 ntBASIC1.82□□□□□ -2.12
P04436 RNU2-69P-201ENST00000516061 100 ntBASIC1.82□□□□□ -2.12
P04436 MTCO3P23-201ENST00000561363 289 ntBASIC1.82□□□□□ -2.12
P04436 MIR5002-201ENST00000584713 97 ntBASIC1.82□□□□□ -2.12
P04436 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
P04436 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
P04436 ELOCP5-201ENST00000604924 333 ntBASIC1.82□□□□□ -2.12
P04436 AC123912.5-201ENST00000605470 343 ntBASIC1.82□□□□□ -2.12
P04436 AC008945.2-201ENST00000606056 604 ntBASIC1.82□□□□□ -2.12
P04436 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
P04436 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.82□□□□□ -2.12
P04436 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.82□□□□□ -2.12
P04436 AC026585.1-201ENST00000619582 524 ntBASIC1.82□□□□□ -2.12
P04436 MIR7843-201ENST00000622274 79 ntBASIC1.82□□□□□ -2.12
P04436 ZNF355P-201ENST00000427301 3216 ntBASIC1.82□□□□□ -2.12
P04436 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
P04436 OR4G2P-201ENST00000328113 903 ntBASIC1.81□□□□□ -2.12
P04436 Y_RNA.324-201ENST00000365165 102 ntBASIC1.81□□□□□ -2.12
P04436 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
P04436 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
P04436 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
P04436 RNU2-2P-201ENST00000410396 191 ntBASIC1.81□□□□□ -2.12
P04436 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.81□□□□□ -2.12
P04436 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
P04436 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.81□□□□□ -2.12
P04436 TOMM20P4-201ENST00000427861 435 ntBASIC1.81□□□□□ -2.12
P04436 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.81□□□□□ -2.12
P04436 AC007969.2-201ENST00000441891 191 ntBASIC1.81□□□□□ -2.12
P04436 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.81□□□□□ -2.12
P04436 snoU13.14-201ENST00000459372 104 ntBASIC1.81□□□□□ -2.12
P04436 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms