Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AP000889.2-201ENST00000532684 490 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AP002770.2-201ENST00000543613 532 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC103810.1-201ENST00000579873 453 ntBASIC2.5□□□□□ -2.01
RAF1P04049 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.5□□□□□ -2.01
RAF1P04049 AL391813.1-201ENST00000603098 260 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC024153.1-201ENST00000603103 365 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC091152.3-201ENST00000604227 325 ntBASIC2.5□□□□□ -2.01
RAF1P04049 AC123912.5-201ENST00000605470 343 ntBASIC2.5□□□□□ -2.01
RAF1P04049 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.5□□□□□ -2.01
RAF1P04049 MIR6134-201ENST00000617606 109 ntBASIC2.5□□□□□ -2.01
RAF1P04049 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.5□□□□□ -2.01
RAF1P04049 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.5□□□□□ -2.01
RAF1P04049 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
RAF1P04049 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
RAF1P04049 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
RAF1P04049 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RAF1P04049 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RAF1P04049 SNORA68.1-201ENST00000364537 132 ntBASIC2.49□□□□□ -2.01
RAF1P04049 Y_RNA.263-201ENST00000364659 114 ntBASIC2.49□□□□□ -2.01
RAF1P04049 RNU6-1180P-201ENST00000364935 107 ntBASIC2.49□□□□□ -2.01
RAF1P04049 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
RAF1P04049 RNU6-19P-201ENST00000384718 107 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.49□□□□□ -2.01
RAF1P04049 PTGES3P4-201ENST00000426243 356 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AL365400.1-201ENST00000431854 640 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.49□□□□□ -2.01
RAF1P04049 AL513124.1-201ENST00000450410 614 ntBASIC2.49□□□□□ -2.01
RAF1P04049 MTND1P11-201ENST00000456661 876 ntBASIC2.49□□□□□ -2.01
RAF1P04049 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
RAF1P04049 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
RAF1P04049 snoU109.2-201ENST00000459316 135 ntBASIC2.49□□□□□ -2.01
RAF1P04049 TRBVA-201ENST00000498804 316 ntBASIC2.49□□□□□ -2.01
RAF1P04049 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC079140.5-201ENST00000507882 310 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.49□□□□□ -2.01
RAF1P04049 RNU6-273P-201ENST00000516937 96 ntBASIC2.49□□□□□ -2.01
RAF1P04049 RNU6-323P-201ENST00000521915 107 ntBASIC2.49□□□□□ -2.01
RAF1P04049 COX6CP5-201ENST00000527162 228 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.49□□□□□ -2.01
RAF1P04049 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.49□□□□□ -2.01
RAF1P04049 RAB11AP2-201ENST00000545905 639 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.49□□□□□ -2.01
RAF1P04049 FGF7P1-201ENST00000582820 288 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AL670379.10-201ENST00000604330 253 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AL670379.9-201ENST00000605428 253 ntBASIC2.49□□□□□ -2.01
RAF1P04049 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.49□□□□□ -2.01
RAF1P04049 AC104985.2-201ENST00000620598 500 ntBASIC2.49□□□□□ -2.01
RAF1P04049 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
RAF1P04049 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAF1P04049 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 MIR627-201ENST00000384979 97 ntBASIC2.48□□□□□ -2.01
RAF1P04049 MIR518D-201ENST00000385014 87 ntBASIC2.48□□□□□ -2.01
RAF1P04049 MIR147B-201ENST00000390185 80 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AL512633.1-201ENST00000399931 655 ntBASIC2.48□□□□□ -2.01
RAF1P04049 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 AC016831.2-201ENST00000417179 352 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.48□□□□□ -2.01
RAF1P04049 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.48□□□□□ -2.01
RAF1P04049 HMGB1P18-201ENST00000438801 619 ntBASIC2.48□□□□□ -2.01
RAF1P04049 RPS15AP7-201ENST00000439294 405 ntBASIC2.48□□□□□ -2.01
RAF1P04049 MTND4LP16-201ENST00000440828 295 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AMD1P1-201ENST00000457220 922 ntBASIC2.48□□□□□ -2.01
RAF1P04049 RNU7-138P-201ENST00000459479 64 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC107626.1-201ENST00000471084 183 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC116655.1-201ENST00000508324 901 ntBASIC2.48□□□□□ -2.01
RAF1P04049 RNU5F-8P-201ENST00000515941 111 ntBASIC2.48□□□□□ -2.01
RAF1P04049 RNU6-1332P-201ENST00000516666 104 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC069113.1-201ENST00000517763 267 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC087854.1-201ENST00000519706 414 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AP005597.4-201ENST00000526762 229 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC023043.2-201ENST00000589678 1026 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AL117336.2-201ENST00000602435 335 ntBASIC2.48□□□□□ -2.01
RAF1P04049 RNU6-85P-201ENST00000605989 107 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.48□□□□□ -2.01
RAF1P04049 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.48□□□□□ -2.01
RAF1P04049 uc_338.5-201ENST00000611839 155 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AL138726.1-201ENST00000614873 333 ntBASIC2.48□□□□□ -2.01
RAF1P04049 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.48□□□□□ -2.01
RAF1P04049 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
RAF1P04049 TPTEP1-208ENST00000636884 213 ntBASIC2.48□□□□□ -2.01
RAF1P04049 CDC27P3-201ENST00000635418 1910 ntBASIC2.48□□□□□ -2.01
RAF1P04049 AC092593.1-201ENST00000515413 1815 ntBASIC2.47□□□□□ -2.01
RAF1P04049 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-37P-201ENST00000362692 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 Y_RNA.135-201ENST00000363439 95 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-11P-201ENST00000364234 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAF1P04049 SET-203ENST00000372688 801 ntTSL 2 BASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-25P-201ENST00000383873 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-1-201ENST00000383898 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-48P-201ENST00000384161 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-36P-201ENST00000384172 107 ntBASIC2.47□□□□□ -2.01
RAF1P04049 RNU6-1013P-201ENST00000384180 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms