Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 AIMP1P2-201ENST00000425294 312 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AL078601.1-201ENST00000444542 271 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CTDNEP1O95476 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 SUB1P2-201ENST00000556401 297 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 LINC00933-203ENST00000559812 219 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 MIR4782-201ENST00000577987 79 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 AC090897.2-201ENST00000581715 130 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AC073539.2-201ENST00000597113 165 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 AL670379.4-201ENST00000605279 254 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AC009161.2-201ENST00000624626 138 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CTDNEP1O95476 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTDNEP1O95476 RNU6-486P-201ENST00000363116 107 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 SNORD14B-201ENST00000364533 90 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 RNU6-1029P-201ENST00000384109 107 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 OR6C66P-201ENST00000414917 930 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.74□□□□□ -2.13
CTDNEP1O95476 MTCO2P19-201ENST00000427513 598 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 FABP5P14-201ENST00000437273 393 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 MTND2P33-201ENST00000506452 1031 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AC116655.1-201ENST00000508324 901 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 MTCO3P7-201ENST00000510008 774 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AF213884.2-201ENST00000510417 903 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.74□□□□□ -2.13
CTDNEP1O95476 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.74□□□□□ -2.13
CTDNEP1O95476 MIR4529-201ENST00000578110 78 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 Z99129.1-201ENST00000612510 255 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AC092656.1-203ENST00000624134 423 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 ZNF680P1-201ENST00000436625 1469 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
CTDNEP1O95476 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AL359854.1-201ENST00000614203 1594 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU4-40P-201ENST00000364351 143 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU4-48P-201ENST00000365559 182 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 Y_RNA.381-201ENST00000365666 102 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU6-116P-201ENST00000384042 109 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU6-1103P-201ENST00000384150 107 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU6-1179P-201ENST00000384667 107 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 Y_RNA.582-201ENST00000391023 95 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNA5SP213-201ENST00000391031 106 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU2-66P-201ENST00000410650 161 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 Y_RNA.623-201ENST00000411128 95 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNA5SP111-201ENST00000411386 101 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 USP9YP6-201ENST00000413550 854 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RPL21P90-201ENST00000415692 466 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AL365338.1-201ENST00000422282 858 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AL669831.1-202ENST00000428504 417 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 DLGAP5P1-201ENST00000430307 464 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 VN1R108P-201ENST00000431580 830 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 GTF2IP13-201ENST00000438487 386 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC104058.1-201ENST00000448028 297 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 MTND1P18-201ENST00000448191 573 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC023194.1-201ENST00000493084 308 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC108078.1-201ENST00000508073 725 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC008526.1-201ENST00000509149 338 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 MTND3P25-201ENST00000509243 135 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 RN7SKP298-201ENST00000515950 94 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 RNU6-405P-201ENST00000516637 110 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC092325.1-201ENST00000566449 554 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 MIR548AC-201ENST00000585049 88 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC008752.3-201ENST00000588113 712 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC087683.1-201ENST00000591187 441 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC103591.3-201ENST00000608684 209 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC005296.1-201ENST00000616145 209 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 AC024581.2-201ENST00000619986 252 ntBASIC1.73□□□□□ -2.13
CTDNEP1O95476 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.73□□□□□ -2.13
CTDNEP1O95476 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CTDNEP1O95476 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CTDNEP1O95476 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 RNU6-942P-201ENST00000363002 107 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 RNU6-60P-201ENST00000364792 103 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 SNORA17.3-201ENST00000391159 129 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 FTH1P15-201ENST00000406984 280 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms