Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-293P-201ENST00000411259 106 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.37□□□□□ -1.87
CTNND1O60716 RNU7-187P-201ENST00000458985 68 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNND1O60716 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNND1O60716 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.37□□□□□ -1.87
CTNND1O60716 BNIP3P16-201ENST00000589779 534 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 uc_338.14-201ENST00000613162 166 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 AC009233.1-201ENST00000616477 371 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTNND1O60716 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.37□□□□□ -1.87
CTNND1O60716 MTND4P23-201ENST00000447723 1363 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 RNU4-82P-201ENST00000362443 140 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 Y_RNA.529-201ENST00000384586 119 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNND1O60716 RNU6-1245P-201ENST00000411130 106 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 FABP5P14-201ENST00000437273 393 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNND1O60716 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNND1O60716 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNND1O60716 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNND1O60716 SNORD109B-201ENST00000458961 67 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 SNORD109A-201ENST00000459128 67 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNND1O60716 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNND1O60716 MRPS36P2-201ENST00000512569 299 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 RN7SKP24-201ENST00000515888 284 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.36□□□□□ -1.87
CTNND1O60716 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.36□□□□□ -1.87
CTNND1O60716 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNND1O60716 AC116312.1-201ENST00000606841 314 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 AL132765.2-201ENST00000610812 351 ntBASIC3.36□□□□□ -1.87
CTNND1O60716 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CTNND1O60716 RBBP8P1-201ENST00000449447 1844 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC009487.2-201ENST00000420969 6821 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 MIR9-1-201ENST00000385198 89 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RNA5SP390-201ENST00000410191 113 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RN7SKP158-201ENST00000410453 326 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RN7SKP284-201ENST00000411002 343 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RNU6-325P-201ENST00000411132 105 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RPL37P10-201ENST00000412884 288 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 ATG3P1-201ENST00000419507 911 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC244505.4-201ENST00000434905 287 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 RPS3AP52-201ENST00000435639 297 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 SSXP5-201ENST00000443473 287 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 PCMTD1P1-201ENST00000455560 355 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNND1O60716 AP001025.1-201ENST00000486139 332 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC018437.1-201ENST00000492214 406 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 MTND3P22-201ENST00000510932 243 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.35□□□□□ -1.87
CTNND1O60716 RAB11AP2-201ENST00000545905 639 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNND1O60716 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNND1O60716 CPDP1-201ENST00000579660 283 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 MIR3945-201ENST00000581853 98 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC019159.1-201ENST00000605094 187 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC013412.1-201ENST00000610687 192 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC024581.2-201ENST00000619986 252 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 AC097372.5-201ENST00000623665 376 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 IGHVIII-44-202ENST00000636235 289 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTNND1O60716 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
CTNND1O60716 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNND1O60716 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
CTNND1O60716 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTNND1O60716 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNND1O60716 MTND5P19-201ENST00000424872 1794 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 Y_RNA.151-201ENST00000363566 112 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 SNORA46-201ENST00000384762 135 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 RNU2-52P-201ENST00000410680 190 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AC243964.1-201ENST00000441814 261 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AC007969.2-201ENST00000441891 191 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 UQCRHP3-201ENST00000451503 251 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 U8.21-201ENST00000459536 136 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AC091179.1-201ENST00000461606 579 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 RN7SL633P-201ENST00000488974 297 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNND1O60716 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.34□□□□□ -1.87
CTNND1O60716 SNORA31.18-201ENST00000517043 134 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 RNU1-54P-201ENST00000517181 120 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNND1O60716 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNND1O60716 AC019193.3-201ENST00000609144 554 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AC096772.1-201ENST00000609146 564 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 AL161423.1-201ENST00000613700 262 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 MIR6128-201ENST00000615528 109 ntBASIC3.34□□□□□ -1.87
CTNND1O60716 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNND1O60716 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTNND1O60716 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTNND1O60716 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.88
CTNND1O60716 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CTNND1O60716 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTNND1O60716 RNU6-1317P-201ENST00000364582 104 ntBASIC3.33□□□□□ -1.88
CTNND1O60716 RNU6-622P-201ENST00000384272 103 ntBASIC3.33□□□□□ -1.88
CTNND1O60716 Y_RNA.474-201ENST00000384341 102 ntBASIC3.33□□□□□ -1.88
CTNND1O60716 RNU6-933P-201ENST00000384424 107 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms