Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KDM1AO60341 AL513302.2-201ENST00000562313 1842 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
KDM1AO60341 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KDM1AO60341 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 RNU6-748P-201ENST00000384648 107 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 RNU6-750P-201ENST00000390946 107 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.47□□□□□ -1.85
KDM1AO60341 MTCYBP2-201ENST00000407745 171 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.47□□□□□ -1.85
KDM1AO60341 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KDM1AO60341 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.47□□□□□ -1.85
KDM1AO60341 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.47□□□□□ -1.85
KDM1AO60341 AC091874.1-201ENST00000511402 339 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.47□□□□□ -1.85
KDM1AO60341 RNU6-764P-201ENST00000516396 105 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 RNU6-1046P-201ENST00000516538 107 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.47□□□□□ -1.85
KDM1AO60341 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.47□□□□□ -1.85
KDM1AO60341 AC010889.1-201ENST00000566193 2666 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KDM1AO60341 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.47□□□□□ -1.85
KDM1AO60341 AC233981.2-201ENST00000611524 1614 ntBASIC3.47□□□□□ -1.85
KDM1AO60341 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KDM1AO60341 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
KDM1AO60341 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KDM1AO60341 RNU6-622P-201ENST00000384272 103 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 Y_RNA.527-201ENST00000384573 102 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 MIR544A-201ENST00000384855 91 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 RNA5SP494-201ENST00000410653 129 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AL358453.1-201ENST00000422522 250 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AL365496.1-201ENST00000426885 215 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 RPL21P40-201ENST00000428586 483 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AL353752.1-201ENST00000454946 260 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AC112492.4-201ENST00000456549 352 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 RN7SL594P-201ENST00000470590 287 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
KDM1AO60341 SNORA31.26-201ENST00000517250 137 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.46□□□□□ -1.86
KDM1AO60341 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.46□□□□□ -1.86
KDM1AO60341 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.46□□□□□ -1.86
KDM1AO60341 AC090897.2-201ENST00000581715 130 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.46□□□□□ -1.86
KDM1AO60341 7SK.7-201ENST00000603504 247 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.46□□□□□ -1.86
KDM1AO60341 AL162373.1-201ENST00000620433 407 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 SCARNA4-201ENST00000629045 128 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AC012442.3-202ENST00000636742 206 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 AC009093.8-201ENST00000641769 292 ntBASIC3.46□□□□□ -1.86
KDM1AO60341 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KDM1AO60341 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.45□□□□□ -1.86
KDM1AO60341 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KDM1AO60341 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
KDM1AO60341 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KDM1AO60341 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RNA5SP124-201ENST00000362739 110 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RNU6-1141P-201ENST00000364520 107 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 SNORA14A-201ENST00000364773 135 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RNU6-1286P-201ENST00000383871 107 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 Y_RNA.645-201ENST00000391229 102 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AL031121.1-201ENST00000406553 254 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RNA5SP390-201ENST00000410191 113 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.45□□□□□ -1.86
KDM1AO60341 MTCO3P29-201ENST00000432119 779 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RPL23AP67-201ENST00000465341 474 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 RN7SL442P-201ENST00000473804 320 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AC110768.1-201ENST00000509222 400 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 SNORA67.7-201ENST00000516664 135 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AC144568.1-201ENST00000520139 137 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.45□□□□□ -1.86
KDM1AO60341 MRPS36P4-201ENST00000534436 298 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 HSBP1P1-201ENST00000555205 166 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC025281.1-201ENST00000567026 265 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 AC104581.2-201ENST00000572227 430 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.45□□□□□ -1.86
KDM1AO60341 AC138305.3-201ENST00000624988 240 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KDM1AO60341 MTND5P1-201ENST00000445440 1375 ntBASIC3.45□□□□□ -1.86
KDM1AO60341 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KDM1AO60341 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
KDM1AO60341 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KDM1AO60341 RNU4-9P-201ENST00000364951 139 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 Y_RNA.455-201ENST00000384230 98 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 RNU6-1222P-201ENST00000384615 107 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KDM1AO60341 SNORA12.2-201ENST00000391040 156 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
KDM1AO60341 AL356057.3-201ENST00000402607 340 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 MTND3P2-201ENST00000438452 342 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 CHEK2P4-201ENST00000450340 246 ntBASIC3.44□□□□□ -1.86
KDM1AO60341 AC104564.1-201ENST00000493028 407 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms