Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.1□□□□□ -2.39
SSSCA1O60232 NEFMP1-201ENST00000443423 1006 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.1□□□□□ -2.39
SSSCA1O60232 ATP5EP1-201ENST00000510257 156 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 AC079140.3-201ENST00000511111 550 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 RNA5SP490-201ENST00000517141 136 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.1□□□□□ -2.39
SSSCA1O60232 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.1□□□□□ -2.39
SSSCA1O60232 AL442163.3-201ENST00000554110 156 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.1□□□□□ -2.39
SSSCA1O60232 AP000654.2-201ENST00000605633 586 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.1□□□□□ -2.39
SSSCA1O60232 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 MIR6788-201ENST00000618842 66 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.1□□□□□ -2.39
SSSCA1O60232 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
SSSCA1O60232 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.39
SSSCA1O60232 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 RNU6-223P-201ENST00000362830 107 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 Y_RNA.332-201ENST00000365271 113 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 RNU6-359P-201ENST00000365466 108 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 SNORD65C-201ENST00000390962 71 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 MIR548J-201ENST00000408833 112 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.09□□□□□ -2.4
SSSCA1O60232 AC092427.1-201ENST00000439177 601 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.09□□□□□ -2.4
SSSCA1O60232 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.09□□□□□ -2.4
SSSCA1O60232 AC012308.1-201ENST00000451232 178 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.09□□□□□ -2.4
SSSCA1O60232 MTND1P9-201ENST00000453775 944 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 TPRKBP1-201ENST00000456243 481 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 MTND1P3-201ENST00000484956 952 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC108740.1-201ENST00000498629 225 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC009646.1-201ENST00000510455 318 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 SNORD60.2-201ENST00000516883 86 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC009902.1-201ENST00000519351 183 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.09□□□□□ -2.4
SSSCA1O60232 KC877982.1-201ENST00000602313 470 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 MIR3976-201ENST00000606807 139 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 MIR6513-201ENST00000621188 64 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.09□□□□□ -2.4
SSSCA1O60232 MIR3529-201ENST00000637713 78 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC132825.7-201ENST00000638744 335 ntBASIC0.09□□□□□ -2.4
SSSCA1O60232 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 SUGT1P1-201ENST00000379514 476 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AF228730.1-201ENST00000397972 663 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.08□□□□□ -2.4
SSSCA1O60232 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.08□□□□□ -2.4
SSSCA1O60232 RPS15AP10-201ENST00000432472 382 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.08□□□□□ -2.4
SSSCA1O60232 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.08□□□□□ -2.4
SSSCA1O60232 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.08□□□□□ -2.4
SSSCA1O60232 ATP5J2P3-201ENST00000451550 258 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.08□□□□□ -2.4
SSSCA1O60232 RN7SKP258-201ENST00000517151 304 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.08□□□□□ -2.4
SSSCA1O60232 AC023050.2-201ENST00000544968 387 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 BNIP3P6-201ENST00000549284 499 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.08□□□□□ -2.4
SSSCA1O60232 MIR151B-201ENST00000584249 96 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AL391001.1-201ENST00000602747 715 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.08□□□□□ -2.4
SSSCA1O60232 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 AC005858.4-201ENST00000623191 700 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 MIR1322-201ENST00000638013 71 ntBASIC0.08□□□□□ -2.4
SSSCA1O60232 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SSSCA1O60232 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-212P-201ENST00000362642 104 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-97P-201ENST00000363387 104 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-1019P-201ENST00000364424 107 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-1335P-201ENST00000365426 107 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 Y_RNA.363-201ENST00000365529 113 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-843P-201ENST00000384454 104 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-1176P-201ENST00000390955 107 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 MIR1276-201ENST00000408707 83 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RNU6-575P-201ENST00000411326 105 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 MTND1P21-201ENST00000412991 285 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 VN1R42P-201ENST00000424651 344 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 MTND2P6-201ENST00000455337 1030 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.07□□□□□ -2.4
SSSCA1O60232 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 RN7SKP12-201ENST00000516275 143 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.07□□□□□ -2.4
SSSCA1O60232 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
SSSCA1O60232 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 AC092106.3-201ENST00000611308 722 ntBASIC0.07□□□□□ -2.4
SSSCA1O60232 Y_RNA.191-201ENST00000363972 113 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 RNU6-707P-201ENST00000364647 95 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 RNU6-1054P-201ENST00000411293 104 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 COX6CP10-201ENST00000416832 224 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 RAC1P6-201ENST00000423911 575 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 MTND4P24-201ENST00000424002 397 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.06□□□□□ -2.4
SSSCA1O60232 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.06□□□□□ -2.4
SSSCA1O60232 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.06□□□□□ -2.4
SSSCA1O60232 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.06□□□□□ -2.4
SSSCA1O60232 AC233266.1-201ENST00000454518 96 ntBASIC0.06□□□□□ -2.4
SSSCA1O60232 AC113410.1-201ENST00000505029 247 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms