Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 USP9YP18-201ENST00000425912 695 ntBASIC2.48□□□□□ -2.01
O00370 MTATP6P13-201ENST00000438531 667 ntBASIC2.48□□□□□ -2.01
O00370 NDUFB1P2-201ENST00000449477 176 ntBASIC2.48□□□□□ -2.01
O00370 AL031274.1-201ENST00000450334 232 ntBASIC2.48□□□□□ -2.01
O00370 EEF1B2P7-201ENST00000451177 676 ntBASIC2.48□□□□□ -2.01
O00370 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.48□□□□□ -2.01
O00370 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.48□□□□□ -2.01
O00370 RNU6-333P-201ENST00000459117 107 ntBASIC2.48□□□□□ -2.01
O00370 RNU7-167P-201ENST00000459160 62 ntBASIC2.48□□□□□ -2.01
O00370 AP001324.2-201ENST00000461163 319 ntBASIC2.48□□□□□ -2.01
O00370 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.48□□□□□ -2.01
O00370 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.48□□□□□ -2.01
O00370 AC011352.1-201ENST00000512300 793 ntBASIC2.48□□□□□ -2.01
O00370 AP003033.1-201ENST00000527244 415 ntBASIC2.48□□□□□ -2.01
O00370 MIR5007-201ENST00000583098 95 ntBASIC2.48□□□□□ -2.01
O00370 AC123912.5-201ENST00000605470 343 ntBASIC2.48□□□□□ -2.01
O00370 AC092807.2-201ENST00000609367 243 ntBASIC2.48□□□□□ -2.01
O00370 MIR3662-201ENST00000637030 95 ntBASIC2.48□□□□□ -2.01
O00370 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
O00370 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.47□□□□□ -2.01
O00370 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
O00370 RNU6-451P-201ENST00000362921 107 ntBASIC2.47□□□□□ -2.01
O00370 RNY4P14-201ENST00000363656 96 ntBASIC2.47□□□□□ -2.01
O00370 RNY3P3-201ENST00000363816 102 ntBASIC2.47□□□□□ -2.01
O00370 Y_RNA.231-201ENST00000364358 102 ntBASIC2.47□□□□□ -2.01
O00370 RNU5E-7P-201ENST00000365290 117 ntBASIC2.47□□□□□ -2.01
O00370 Y_RNA.373-201ENST00000365600 103 ntBASIC2.47□□□□□ -2.01
O00370 SNORD116-20-201ENST00000384529 92 ntBASIC2.47□□□□□ -2.01
O00370 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.47□□□□□ -2.01
O00370 CIR1P3-201ENST00000405137 479 ntBASIC2.47□□□□□ -2.01
O00370 POLHP1-201ENST00000411806 470 ntBASIC2.47□□□□□ -2.01
O00370 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.47□□□□□ -2.01
O00370 AL139415.2-201ENST00000431968 163 ntBASIC2.47□□□□□ -2.01
O00370 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.47□□□□□ -2.01
O00370 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.47□□□□□ -2.01
O00370 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
O00370 AL441985.1-201ENST00000457727 251 ntBASIC2.47□□□□□ -2.01
O00370 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.47□□□□□ -2.01
O00370 MTAPP1-201ENST00000489154 819 ntBASIC2.47□□□□□ -2.01
O00370 AC026801.1-201ENST00000497178 464 ntBASIC2.47□□□□□ -2.01
O00370 RNU6-189P-201ENST00000516120 101 ntBASIC2.47□□□□□ -2.01
O00370 RNA5SP24-201ENST00000516478 95 ntBASIC2.47□□□□□ -2.01
O00370 SNORD60.2-201ENST00000516883 86 ntBASIC2.47□□□□□ -2.01
O00370 CENPUP1-201ENST00000526649 1202 ntBASIC2.47□□□□□ -2.01
O00370 AL133241.1-201ENST00000556832 487 ntBASIC2.47□□□□□ -2.01
O00370 MIR3945-201ENST00000581853 98 ntBASIC2.47□□□□□ -2.01
O00370 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
O00370 MIR4424-201ENST00000585257 86 ntBASIC2.47□□□□□ -2.01
O00370 AP000907.4-201ENST00000604143 237 ntBASIC2.47□□□□□ -2.01
O00370 AC069294.1-201ENST00000608397 350 ntBASIC2.47□□□□□ -2.01
O00370 AL121757.2-201ENST00000611223 313 ntBASIC2.47□□□□□ -2.01
O00370 RMST_4.1-201ENST00000616886 107 ntBASIC2.47□□□□□ -2.01
O00370 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
O00370 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.47□□□□□ -2.01
O00370 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
O00370 AC097372.5-201ENST00000623665 376 ntBASIC2.47□□□□□ -2.01
O00370 SCARNA4-202ENST00000625402 129 ntBASIC2.47□□□□□ -2.01
O00370 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.47□□□□□ -2.01
O00370 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
O00370 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
O00370 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
O00370 AC138393.1-203ENST00000327086 343 ntBASIC2.46□□□□□ -2.02
O00370 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
O00370 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
O00370 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
O00370 RAP1BP3-201ENST00000407180 549 ntBASIC2.46□□□□□ -2.02
O00370 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.46□□□□□ -2.02
O00370 RN7SKP284-201ENST00000411002 343 ntBASIC2.46□□□□□ -2.02
O00370 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.46□□□□□ -2.02
O00370 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.46□□□□□ -2.02
O00370 BX276092.3-201ENST00000424182 230 ntBASIC2.46□□□□□ -2.02
O00370 AL365400.1-201ENST00000431854 640 ntBASIC2.46□□□□□ -2.02
O00370 RPS15AP28-201ENST00000435088 386 ntBASIC2.46□□□□□ -2.02
O00370 AC087884.1-201ENST00000469738 328 ntBASIC2.46□□□□□ -2.02
O00370 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.46□□□□□ -2.02
O00370 AC083904.1-201ENST00000487828 231 ntBASIC2.46□□□□□ -2.02
O00370 RPL23AP49-201ENST00000492925 468 ntBASIC2.46□□□□□ -2.02
O00370 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
O00370 SNORD19.2-201ENST00000516978 73 ntBASIC2.46□□□□□ -2.02
O00370 AP005902.1-201ENST00000521358 186 ntBASIC2.46□□□□□ -2.02
O00370 RNU6-85P-201ENST00000605989 107 ntBASIC2.46□□□□□ -2.02
O00370 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
O00370 AL357078.3-201ENST00000607528 618 ntBASIC2.46□□□□□ -2.02
O00370 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.46□□□□□ -2.02
O00370 RMST_3.1-201ENST00000611651 109 ntBASIC2.46□□□□□ -2.02
O00370 AC024614.3-201ENST00000637860 256 ntBASIC2.46□□□□□ -2.02
O00370 AC100810.6-201ENST00000638068 285 ntBASIC2.46□□□□□ -2.02
O00370 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.46□□□□□ -2.02
O00370 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
O00370 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
O00370 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
O00370 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.45□□□□□ -2.02
O00370 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
O00370 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
O00370 RNU6-1252P-201ENST00000363054 104 ntBASIC2.45□□□□□ -2.02
O00370 RNU6-534P-201ENST00000364877 106 ntBASIC2.45□□□□□ -2.02
O00370 Y_RNA.480-201ENST00000384364 102 ntBASIC2.45□□□□□ -2.02
O00370 Y_RNA.615-201ENST00000410769 117 ntBASIC2.45□□□□□ -2.02
O00370 OOSP1P1-201ENST00000423265 274 ntBASIC2.45□□□□□ -2.02
O00370 EIF4EP4-201ENST00000424916 578 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms