Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CYB5AP5-201ENST00000549779 389 ntBASIC-0.16□□□□□ -2.43
COL6A5A8TX70 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL6A5A8TX70 FTX_2.1-201ENST00000618816 94 ntBASIC-0.16□□□□□ -2.43
COL6A5A8TX70 AC010809.3-201ENST00000621310 641 ntBASIC-0.16□□□□□ -2.43
COL6A5A8TX70 MTND5P30-201ENST00000452896 1731 ntBASIC-0.16□□□□□ -2.43
COL6A5A8TX70 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 RNU6-532P-201ENST00000384318 107 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AC108729.1-201ENST00000487812 947 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
COL6A5A8TX70 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 RN7SKP164-201ENST00000516138 266 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AP003716.2-201ENST00000528260 108 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AP000238.1-201ENST00000608759 426 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 AC022960.3-201ENST00000619794 441 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 MTND5P16-201ENST00000460269 1703 ntBASIC-0.16□□□□□ -2.44
COL6A5A8TX70 RNU4-84P-201ENST00000364200 139 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNORA1.1-201ENST00000364671 133 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNORD89-201ENST00000390981 114 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNRPEP9-201ENST00000436794 238 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 MTCO3P17-201ENST00000443775 513 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 MIR377-201ENST00000362145 69 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNORD114-24-201ENST00000365029 72 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNORA12.1-201ENST00000390873 148 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AC025465.3-201ENST00000510570 311 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 RN7SKP19-201ENST00000516016 252 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 SNRPGP20-201ENST00000604477 205 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 BX284668.6-201ENST00000606899 438 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL6A5A8TX70 AC092447.10-201ENST00000620607 1652 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 RNU6-317P-201ENST00000384031 107 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 MIR514A1-201ENST00000385133 98 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC139712.2-201ENST00000424302 339 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC073261.1-201ENST00000429409 121 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC098869.1-201ENST00000481627 292 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 MTCO3P5-201ENST00000433620 714 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 RPS15AP9-201ENST00000439856 381 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 RNU6-953P-201ENST00000459154 107 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 AC090079.2-201ENST00000575289 768 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 uc_338.15-201ENST00000615470 191 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 RNU6-156P-201ENST00000621869 107 ntBASIC-0.18□□□□□ -2.44
COL6A5A8TX70 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A5A8TX70 MIR302D-201ENST00000362275 68 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 MTCO1P20-201ENST00000425366 358 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC107297.1-201ENST00000459991 176 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AL121652.1-201ENST00000608851 448 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC107982.1-201ENST00000507171 1300 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 MIRLET7D-201ENST00000362263 87 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 RNU6-546P-201ENST00000383991 107 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC007742.1-201ENST00000425789 329 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 ELOCP26-201ENST00000436067 329 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 DDX3P2-201ENST00000446138 111 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 SCARNA18-201ENST00000459004 134 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 RPL17P19-201ENST00000489069 552 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL6A5A8TX70 TMF1P1-201ENST00000576058 373 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.19□□□□□ -2.44
COL6A5A8TX70 AL391834.1-201ENST00000609609 560 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms