Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 ARL5AP1-201ENST00000418991 388 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 ARL5AP4-201ENST00000430731 512 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC236972.1-201ENST00000433225 199 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 MRPL50P4-201ENST00000446432 475 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC011753.1-201ENST00000451001 220 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 RNU7-138P-201ENST00000459479 64 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 RPL7P43-201ENST00000478876 753 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC069439.1-201ENST00000494739 167 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC008628.2-201ENST00000502605 298 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 RNU6-1069P-201ENST00000516612 133 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 RNU6-273P-201ENST00000516937 96 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 SNORA31.18-201ENST00000517043 134 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 MTND1P5-201ENST00000517906 940 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC079600.2-201ENST00000550076 130 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC105137.2-201ENST00000569073 466 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 MIR4672-201ENST00000583126 81 ntBASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX6-3A6NJ46 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-529P-201ENST00000363383 104 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-105P-201ENST00000363909 104 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-692P-201ENST00000384496 107 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-1072P-201ENST00000384703 107 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-443P-201ENST00000384780 107 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 EIF4E2P1-201ENST00000393781 255 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AL360182.1-201ENST00000397433 468 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AL445529.1-201ENST00000398713 389 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 MIR450B-201ENST00000401182 78 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNA5SP181-201ENST00000410246 98 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RNU6-1245P-201ENST00000411130 106 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 SNRPEP10-201ENST00000420249 274 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 RPS3AP44-201ENST00000425466 790 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC112220.1-201ENST00000434628 355 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 MTATP6P13-201ENST00000438531 667 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 SNORD109B-201ENST00000458961 67 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 SNORD109A-201ENST00000459128 67 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC079140.5-201ENST00000507882 310 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AP005597.4-201ENST00000526762 229 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC010186.2-204ENST00000537668 439 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC090897.2-201ENST00000581715 130 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 MIR3162-201ENST00000581818 82 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC006023.1-201ENST00000603944 259 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC104458.1-201ENST00000608243 463 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC096772.1-201ENST00000609146 564 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC092608.2-201ENST00000624427 218 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.22□□□□□ -2.05
NKX6-3A6NJ46 AC062016.1-201ENST00000355719 319 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 SNORD62.1-201ENST00000362541 86 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 RNU1-112P-201ENST00000364401 164 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 RNU6-1032P-201ENST00000384100 107 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 RNU6-622P-201ENST00000384272 103 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 MIR592-201ENST00000384959 97 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AL117339.3-201ENST00000418733 162 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC063976.3-201ENST00000426849 329 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 SRIP2-201ENST00000428470 166 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC104389.3-201ENST00000445629 235 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC133134.1-201ENST00000466800 359 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 UBE2DNL-203ENST00000474922 222 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP402-201ENST00000517148 110 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC109329.2-201ENST00000519658 482 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC087854.1-201ENST00000519706 414 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC079598.5-201ENST00000547460 117 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 MIR4319-201ENST00000577285 85 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC105245.1-201ENST00000581934 244 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC073410.2-201ENST00000603240 332 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC069294.1-201ENST00000608397 350 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC064836.2-201ENST00000609491 462 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC010329.5-201ENST00000623497 2174 ntBASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NKX6-3A6NJ46 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms