Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNU6-113P-201ENST00000516653 101 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 RN7SKP219-201ENST00000516825 296 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC091163.3-201ENST00000518269 1144 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC090142.3-201ENST00000519012 385 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC015712.3-201ENST00000559380 164 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AL159153.1-201ENST00000619688 317 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 SNORA63D-201ENST00000364359 132 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-1019P-201ENST00000364424 107 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 Y_RNA.408-201ENST00000383987 102 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 TIMM9P2-201ENST00000419324 266 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTCYBP5-201ENST00000423752 1135 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AL591212.2-201ENST00000433923 257 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND1P30-201ENST00000441241 901 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 PAXBP1P1-201ENST00000449315 447 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 snoU13.27-201ENST00000459278 104 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 RPS26P45-201ENST00000471748 340 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND1P3-201ENST00000484956 952 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC117454.1-201ENST00000491120 168 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND2P33-201ENST00000506452 1031 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC074344.1-201ENST00000512823 224 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR449C-201ENST00000516047 92 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-914P-201ENST00000516749 109 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 AC105129.3-201ENST00000605455 485 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND5P42-201ENST00000637720 498 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 MTND5P33-201ENST00000571250 1450 ntBASIC0.45□□□□□ -2.34
TRBV27A0A0K0K1C4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-468P-201ENST00000384003 109 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-278P-201ENST00000390945 109 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-1176P-201ENST00000390955 107 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AC099677.2-201ENST00000436385 175 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 GTF2IP13-201ENST00000438487 386 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 CALM1P1-201ENST00000442082 433 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 ZNF886P-201ENST00000450781 723 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AC104417.1-201ENST00000523974 751 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR3912-201ENST00000577566 105 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 VN1R87P-201ENST00000596706 487 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AL590095.2-201ENST00000604136 117 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 AL451064.1-201ENST00000607718 471 ntBASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
TRBV27A0A0K0K1C4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR340-201ENST00000362125 95 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-392P-201ENST00000364926 101 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 SNORA75B-201ENST00000384053 137 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR92A1-201ENST00000385233 78 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AL359704.1-201ENST00000411586 781 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 RPS3AP1-201ENST00000413190 320 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AP000542.1-201ENST00000448473 371 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AL163540.1-201ENST00000485382 386 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 SUMO2P5-201ENST00000506790 245 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 RNA5SP168-201ENST00000516642 112 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 DEFB108A-201ENST00000530110 222 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC025423.5-201ENST00000550230 219 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 BNIP3P8-201ENST00000597863 560 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC098483.2-201ENST00000603158 454 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR3976-201ENST00000606807 139 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC022893.3-201ENST00000607665 437 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR6835-201ENST00000621552 64 ntBASIC0.43□□□□□ -2.34
TRBV27A0A0K0K1C4 AC068700.1-201ENST00000565862 3754 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 MIR373-201ENST00000362273 69 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 SNORD32B-201ENST00000364460 84 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 RNA5SP259-201ENST00000365541 109 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 SNORA18.2-201ENST00000383865 132 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 Y_RNA.623-201ENST00000411128 95 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AC063976.4-201ENST00000421971 163 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AL953862.1-201ENST00000423016 168 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AL355994.1-201ENST00000424379 260 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AL008629.1-201ENST00000438615 184 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 AC092473.1-201ENST00000441098 221 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 SNRPEP8-201ENST00000442866 260 ntBASIC0.42□□□□□ -2.34
TRBV27A0A0K0K1C4 EEF1E1P1-201ENST00000446998 430 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms