Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-201P-201ENST00000517100 61 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AP003033.1-201ENST00000527244 415 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC112187.2-201ENST00000604345 283 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 AC018645.2-201ENST00000609151 472 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.28□□□□□ -2.2
USH1CQ9Y6N9 MIR337-201ENST00000362281 93 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 RNU6-1179P-201ENST00000384667 107 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 MTCYBP5-201ENST00000423752 1135 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 RPS15AP10-201ENST00000432472 382 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 RPL22P17-201ENST00000438729 315 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC092473.1-201ENST00000441098 221 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AL031313.1-201ENST00000448435 256 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC134050.1-201ENST00000495088 933 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 MTCYBP18-201ENST00000501056 747 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC116347.2-201ENST00000514912 523 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 RNU7-51P-201ENST00000516560 62 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 COPS8P3-201ENST00000526024 482 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AL356057.1-201ENST00000533798 831 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 MIR548AC-201ENST00000585049 88 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 BNIP3P40-201ENST00000596017 556 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 PRR13P7-201ENST00000605538 430 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC013244.3-201ENST00000605614 388 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 MIR8074-201ENST00000615081 81 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 AC130454.1-201ENST00000622948 401 ntBASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.27□□□□□ -2.21
USH1CQ9Y6N9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 ZNF29P-201ENST00000225587 168 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 NCOR1P3-201ENST00000420479 303 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 HMGB1P31-201ENST00000437242 427 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AL354941.1-201ENST00000438600 464 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AL035666.1-201ENST00000446195 348 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC112492.4-201ENST00000456549 352 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC105185.1-201ENST00000518705 535 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC022616.6-201ENST00000520479 119 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC087441.2-201ENST00000529141 262 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 BNIP3P6-201ENST00000549284 499 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AC137800.2-201ENST00000574375 120 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 AL157392.4-201ENST00000609756 345 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 RMST_6.1-201ENST00000611980 203 ntBASIC1.26□□□□□ -2.21
USH1CQ9Y6N9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 RNA5SP493-201ENST00000364115 91 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL590556.1-201ENST00000423231 483 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 CBX3P6-201ENST00000430257 527 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL590365.1-201ENST00000450788 243 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 snoU109.3-201ENST00000459477 145 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 RPL30P1-201ENST00000488676 339 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AC009646.1-201ENST00000510455 318 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 SNORA31.17-201ENST00000516953 127 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 ADI1P3-201ENST00000549509 470 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 MIR3118-1-201ENST00000581787 76 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL353778.1-201ENST00000603149 408 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AL139022.2-201ENST00000606934 443 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 AP002782.1-201ENST00000623107 614 ntBASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH1CQ9Y6N9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 RNU6-931P-201ENST00000363850 107 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 Y_RNA.302-201ENST00000364997 102 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AC092648.1-201ENST00000425870 423 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 MTND5P25-201ENST00000430499 799 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AC010409.1-201ENST00000487382 476 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms