Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC244517.12-201ENST00000623581 663 ntBASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM4Q9ULL8 SNORD114-19-201ENST00000363072 75 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 AC010975.2-201ENST00000427781 588 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.687-201ENST00000516558 91 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 MTATP6P3-201ENST00000581686 676 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 AC073539.2-201ENST00000597113 165 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 AL359198.2-201ENST00000611836 194 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 Z75746.1-201ENST00000440243 2080 ntBASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SHROOM4Q9ULL8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 OR4G2P-201ENST00000328113 903 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.324-201ENST00000365165 102 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 MIR499A-201ENST00000384903 122 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 RNA5SP213-201ENST00000391031 106 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 CYCSP49-201ENST00000420810 319 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 RPL7P54-201ENST00000438336 674 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 BNIP3P6-201ENST00000549284 499 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 MIR5571-201ENST00000577998 113 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 Z82243.1-201ENST00000609432 473 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC139792.3-201ENST00000623525 224 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC135776.4-201ENST00000624300 1904 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AL139276.1-201ENST00000311910 1001 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 DEFA7P-201ENST00000382676 285 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 RNU2-3P-201ENST00000410144 191 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC138623.1-201ENST00000418060 216 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC080013.2-201ENST00000460866 323 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC112771.1-201ENST00000463581 102 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AP005435.4-201ENST00000529514 284 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC135279.1-201ENST00000543493 504 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 AC245505.1-201ENST00000556398 224 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 MIR4255-201ENST00000579351 72 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 LRRC37A5P-203ENST00000580181 585 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 MIR4506-201ENST00000584693 77 ntBASIC4.11□□□□□ -1.75
SHROOM4Q9ULL8 HAUS6P2-201ENST00000433254 2404 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-1322P-201ENST00000364309 107 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.255-201ENST00000364581 97 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-843P-201ENST00000384454 104 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 Y_RNA.517-201ENST00000384551 106 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 RPL19P1-201ENST00000411635 428 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AL139156.1-201ENST00000412785 841 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 MED28P2-201ENST00000475771 317 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AL137161.1-201ENST00000532231 390 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AC023824.2-201ENST00000566185 400 ntBASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHROOM4Q9ULL8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 RNU6-1158P-201ENST00000391167 107 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 AL669831.1-202ENST00000428504 417 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 GTF2IP13-201ENST00000438487 386 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 PRPS1P1-201ENST00000445305 876 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 MTND1P1-201ENST00000445453 368 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 MTCO2P7-201ENST00000446518 666 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 AC109329.1-201ENST00000518744 317 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 MTND4P7-201ENST00000523876 130 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 MIR6132-201ENST00000622083 109 ntBASIC4.09□□□□□ -1.75
SHROOM4Q9ULL8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.09□□□□□ -1.76
SHROOM4Q9ULL8 U8.9-201ENST00000365667 134 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 SNORD116-20-201ENST00000384529 92 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-1127P-201ENST00000384580 107 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 MIR489-201ENST00000384923 84 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AL133475.1-201ENST00000404414 305 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 RN7SKP123-201ENST00000410732 291 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AC074117.2-201ENST00000417130 397 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 MTCYBP8-201ENST00000422855 651 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 DLGAP5P1-201ENST00000430307 464 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 HMGB1P31-201ENST00000437242 427 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 CALM1P1-201ENST00000442082 433 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 PSPHP1-201ENST00000450062 261 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 SNORA43.2-201ENST00000516652 128 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AC010186.2-204ENST00000537668 439 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 AC078795.2-201ENST00000602835 1252 ntBASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.08□□□□□ -1.76
SHROOM4Q9ULL8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms