Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 MIR3199-1-201ENST00000582434 88 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC008121.1-201ENST00000603244 268 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC008536.2-201ENST00000607284 349 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC022893.3-201ENST00000607665 437 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 MIR6134-201ENST00000617606 109 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 Z99571.1-201ENST00000636677 394 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 MTND5P30-201ENST00000452896 1731 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 CDC27P3-201ENST00000635418 1910 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 Z98749.2-208ENST00000381646 500 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 RNU6-946P-201ENST00000383878 107 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 RNU4-52P-201ENST00000384209 138 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 RNU2-41P-201ENST00000410991 178 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 OR51A5P-201ENST00000415429 942 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 HMGN2P38-201ENST00000423806 265 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC137499.1-201ENST00000427602 88 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 HMGN2P3-201ENST00000433603 273 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 HMGN2P5-201ENST00000436882 273 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 C1DP4-201ENST00000455429 424 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 HMGN1P12-201ENST00000499125 195 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 MTCO2P30-201ENST00000503662 364 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 RNU7-51P-201ENST00000516560 62 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 SCARNA3-201ENST00000517097 143 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 RNU6-1315P-201ENST00000517187 99 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AP005902.1-201ENST00000521358 186 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC010186.2-204ENST00000537668 439 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AL121821.2-201ENST00000556081 394 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 HMGB1P33-201ENST00000563485 527 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AL391840.1-201ENST00000571144 367 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 MIR5571-201ENST00000577998 113 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 FGF7P1-201ENST00000582820 288 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 MIR4719-201ENST00000585233 84 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AL031601.2-202ENST00000622650 282 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AL512643.1-201ENST00000635735 524 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC112487.2-201ENST00000637950 304 ntBASIC2.46□□□□□ -2.02
CLIP2Q9UDT6 AC006026.1-201ENST00000444025 1803 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.1-201ENST00000352915 104 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.402-201ENST00000383972 102 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.509-201ENST00000384506 99 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RNU6-19P-201ENST00000384718 107 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC007283.2-201ENST00000424739 197 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RPL23AP7-203ENST00000449021 469 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 FDX1P2-201ENST00000450769 375 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC007182.2-201ENST00000489251 402 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 MTCYBP18-201ENST00000501056 747 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RPL38P4-201ENST00000502376 214 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.672-201ENST00000516289 104 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RNU6-914P-201ENST00000516749 109 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 CYCSP26-201ENST00000534107 320 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 MIR3167-201ENST00000579623 85 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 MIR5002-201ENST00000584713 97 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AC060780.3-201ENST00000589464 80 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 AL121917.1-203ENST00000605534 577 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 SNORD14A-201ENST00000606526 91 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 RMST_3.1-201ENST00000611651 109 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 U6.99-201ENST00000637524 83 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 MTND4P12-201ENST00000498999 1377 ntBASIC2.45□□□□□ -2.02
CLIP2Q9UDT6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 RNU5E-1-201ENST00000362477 120 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 RNU6-181P-201ENST00000363225 107 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 Y_RNA.394-201ENST00000383942 103 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 MIR218-1-201ENST00000384999 110 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 MIR504-201ENST00000385065 83 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AL356776.1-201ENST00000406574 447 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 RNU2-2P-201ENST00000410396 191 ntBASIC2.44□□□□□ -2.02
CLIP2Q9UDT6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms