Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC116655.1-201ENST00000508324 901 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 TPT1P8-201ENST00000510120 555 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-1092P-201ENST00000516955 87 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 SNORA48.11-201ENST00000517015 89 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-586P-201ENST00000517265 104 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RPL30P11-203ENST00000598995 310 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL353778.1-201ENST00000603149 408 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 PRR13P7-201ENST00000605538 430 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MIR8074-201ENST00000615081 81 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC013470.4-201ENST00000619978 986 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.355-201ENST00000365462 98 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNU6-160P-201ENST00000384591 107 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 CALM1P1-201ENST00000442082 433 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC079448.1-201ENST00000449377 373 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC112492.4-201ENST00000456549 352 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNU6-333P-201ENST00000459117 107 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNA5SP57-201ENST00000459463 123 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC011979.2-201ENST00000527568 352 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC022616.8-201ENST00000533569 253 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC079598.5-201ENST00000547460 117 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC022893.3-201ENST00000607665 437 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL355816.2-201ENST00000610049 647 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC130324.3-201ENST00000614165 542 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 MTND5P42-201ENST00000637720 498 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC073343.1-201ENST00000328239 651 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 SNORD14B-201ENST00000364533 90 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 MIR613-201ENST00000385248 95 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RPS20P2-201ENST00000402520 389 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNU6-1025P-201ENST00000410629 104 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.623-201ENST00000411128 95 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 PIGPP2-201ENST00000411569 458 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 SRIP3-201ENST00000413200 219 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 TXNL1P1-201ENST00000429528 554 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL117351.1-201ENST00000438864 766 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC244505.5-201ENST00000443639 207 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC003071.1-201ENST00000451219 789 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 PRELID3BP1-201ENST00000457142 540 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RPL30P12-201ENST00000474666 353 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AP001025.1-201ENST00000486139 332 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC013828.2-201ENST00000532487 235 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL160236.1-201ENST00000556317 195 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 TMF1P1-201ENST00000576058 373 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC010900.2-201ENST00000604508 210 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC016925.2-201ENST00000605108 242 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC092106.3-201ENST00000611308 722 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 uc_338.11-201ENST00000619132 160 ntBASIC0.98□□□□□ -2.25
CCDC88CQ9P219 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC88CQ9P219 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 SNORA75B-201ENST00000384053 137 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 SNORD14D-201ENST00000384390 87 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.534-201ENST00000384599 112 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 RNU2-3P-201ENST00000410144 191 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC009310.1-201ENST00000414414 451 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AL606662.1-201ENST00000445763 553 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 MTCYBP43-201ENST00000513621 740 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 RNU6-113P-201ENST00000516653 101 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 RNU6-201P-201ENST00000517100 61 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 CYCSP27-201ENST00000527643 293 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC022878.1-201ENST00000530684 149 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 ADI1P3-201ENST00000549509 470 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC073544.2-201ENST00000601155 540 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms