Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RN7SL633P-201ENST00000488974 297 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 HMGB1P30-201ENST00000492455 606 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RPS27P27-201ENST00000498779 255 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RPL39P5-202ENST00000512505 151 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR3171-201ENST00000584270 74 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC123912.5-201ENST00000605470 343 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AL355802.3-201ENST00000607571 545 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 RMST_4.1-201ENST00000616886 107 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AC138627.2-201ENST00000624202 601 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 AL137790.1-201ENST00000634283 177 ntBASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NCKIPSDQ9NZQ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
NCKIPSDQ9NZQ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
NCKIPSDQ9NZQ3 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-166P-201ENST00000384371 107 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 MTCYBP4-201ENST00000401524 249 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AL139396.1-201ENST00000421137 167 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 TOMM20P4-201ENST00000427861 435 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC027575.1-201ENST00000481064 460 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC090096.1-201ENST00000489168 390 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC009812.2-201ENST00000517657 457 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC007151.1-201ENST00000572774 483 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 SNRPGP17-201ENST00000603780 214 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 ELOCP5-201ENST00000604924 333 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC116312.1-201ENST00000606841 314 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC098657.3-201ENST00000620434 263 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 MAPK10-322ENST00000641485 4530 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AC009487.2-201ENST00000420969 6821 ntBASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NCKIPSDQ9NZQ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 MIR22-201ENST00000362190 85 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-128P-201ENST00000383976 107 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-474P-201ENST00000384243 107 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 SNORD73A-201ENST00000386062 65 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AL359672.1-201ENST00000442302 409 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 BTF3P15-201ENST00000455606 336 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC026801.1-201ENST00000497178 464 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC092436.3-201ENST00000511788 257 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC022634.1-201ENST00000520765 532 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 ELOCP31-201ENST00000540463 467 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 LINC00933-203ENST00000559812 219 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 ELOCP29-201ENST00000588193 334 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AL355877.2-201ENST00000603670 358 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AC080078.3-201ENST00000605407 463 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 AL080274.1-201ENST00000605565 220 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.01□□□□□ -1.93
NCKIPSDQ9NZQ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 MIR369-201ENST00000362155 70 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 SNORD14B-201ENST00000364533 90 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 SNORA63C-201ENST00000364578 129 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 Y_RNA.395-201ENST00000383945 109 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 Y_RNA.473-201ENST00000384333 102 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 RNU2-49P-201ENST00000410666 184 ntBASIC3□□□□□ -1.93
NCKIPSDQ9NZQ3 RPL21P2-201ENST00000440049 481 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms