Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-6P-201ENST00000606623 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 MTND4LP32-201ENST00000636111 270 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.394-201ENST00000383942 103 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-128P-201ENST00000383976 107 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-214P-201ENST00000384130 107 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AL356057.3-201ENST00000402607 340 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 FO393413.1-201ENST00000402892 195 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 RN7SKP158-201ENST00000410453 326 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AL139396.1-201ENST00000421137 167 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AL627311.1-201ENST00000431514 115 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.635-201ENST00000459041 101 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC130509.1-201ENST00000464158 433 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 RPL39P5-202ENST00000512505 151 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AMZ2P1-203ENST00000565833 850 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 OR1M4P-201ENST00000589199 287 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC019159.1-201ENST00000605094 187 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AL133255.1-201ENST00000606374 441 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC064836.2-201ENST00000609491 462 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AC090574.1-201ENST00000623186 233 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 AL137790.1-201ENST00000634283 177 ntBASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.79□□□□□ -1.96
SMARCAL1Q9NZC9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-778P-201ENST00000363269 103 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.259-201ENST00000364619 101 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 Z98749.2-208ENST00000381646 500 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 SNORD116-29-201ENST00000384516 83 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-95P-201ENST00000384697 107 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RPL19P1-201ENST00000411635 428 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AL353729.1-201ENST00000425044 720 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 FABP5P14-201ENST00000437273 393 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 HMGN1P13-201ENST00000505795 138 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RAC1P5-201ENST00000512182 576 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-703P-201ENST00000516946 107 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AC005000.2-201ENST00000605468 310 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 MIR6128-201ENST00000615528 109 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 AC138627.2-201ENST00000624202 601 ntBASIC2.78□□□□□ -1.96
SMARCAL1Q9NZC9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SMARCAL1Q9NZC9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1329P-201ENST00000365664 107 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RNU1-73P-201ENST00000383971 164 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.460-201ENST00000384255 102 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL360182.1-201ENST00000397433 468 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-370P-201ENST00000411008 104 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RPS20P15-201ENST00000412792 311 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC016831.2-201ENST00000417179 352 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 SNAP23P1-201ENST00000433229 246 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 snoU13.28-201ENST00000459235 104 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC079140.5-201ENST00000507882 310 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1183P-201ENST00000517054 60 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 MIR4782-201ENST00000577987 79 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 MIR4719-201ENST00000585233 84 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC044792.1-201ENST00000593294 196 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL645944.1-201ENST00000603857 493 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 AL353621.2-201ENST00000605340 133 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms