Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR548P-201ENST00000408336 84 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC138623.1-201ENST00000418060 216 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 NUP35P1-201ENST00000422734 947 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 SNRPGP7-201ENST00000469016 106 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 RNU6-976P-201ENST00000516086 111 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 SNORA31.6-201ENST00000516241 130 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 SNRPGP18-201ENST00000553000 214 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC020661.2-201ENST00000560114 134 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC105137.2-201ENST00000569073 466 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 MIR4286-201ENST00000580651 93 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC008739.2-201ENST00000597006 317 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC007742.2-201ENST00000618226 398 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AL731566.2-201ENST00000618971 317 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC007792.1-201ENST00000623023 402 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 AC099654.10-201ENST00000640395 161 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RNY1P16-201ENST00000363063 111 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RNU6-595P-201ENST00000363944 107 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 U3.26-201ENST00000391236 204 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RNU2-23P-201ENST00000410545 195 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AL353997.1-201ENST00000432936 108 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RPS29P12-201ENST00000460178 152 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RPL31P41-201ENST00000477967 372 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 RPL17P19-201ENST00000489069 552 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC104564.1-201ENST00000493028 407 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AP000889.1-201ENST00000530968 660 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 HSPE1P4-201ENST00000550617 308 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AL442663.2-201ENST00000554385 511 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC060766.3-201ENST00000591442 263 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 SNRPGP17-201ENST00000603780 214 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 MIR6798-201ENST00000612887 67 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AC099654.7-201ENST00000635788 2127 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 AL109809.4-201ENST00000603520 2185 ntBASIC3.36□□□□□ -1.87
MKS1Q9NXB0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 SNORD114-19-201ENST00000363072 75 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 RN7SKP61-201ENST00000410642 295 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AC078809.1-201ENST00000427601 140 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL137792.2-201ENST00000443484 235 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL513124.1-201ENST00000450410 614 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 MRPS36P4-201ENST00000534436 298 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 MIR3171-201ENST00000584270 74 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 RPL23AP78-201ENST00000599928 470 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AC069200.1-201ENST00000609511 323 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 AL159153.1-201ENST00000619688 317 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 SNORA43.4-201ENST00000629559 138 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
MKS1Q9NXB0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.35□□□□□ -1.87
MKS1Q9NXB0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 RNU6-968P-201ENST00000384076 107 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.504-201ENST00000384481 104 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms