Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU6-767P-201ENST00000384132 107 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNU6-1013P-201ENST00000384180 107 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 MIR592-201ENST00000384959 97 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNU2-25P-201ENST00000411041 191 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC113155.1-201ENST00000511141 769 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC087854.1-201ENST00000519706 414 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC022634.1-201ENST00000520765 532 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AP002770.2-201ENST00000543613 532 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 HMGN2P15-201ENST00000585707 270 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AP000787.2-201ENST00000604432 568 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 MTND4LP5-201ENST00000605152 292 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 AC002044.1-201ENST00000606707 158 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DDX4Q9NQI0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 CBX3P1-201ENST00000325243 554 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 Y_RNA.166-201ENST00000363730 102 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 Y_RNA.303-201ENST00000364998 94 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 MTND5P20-201ENST00000448677 143 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC006026.2-201ENST00000457376 180 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 PMCHL2-203ENST00000457791 237 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 RNU7-66P-201ENST00000459469 62 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 RNU7-138P-201ENST00000459479 64 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 RPS29P21-201ENST00000496272 170 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 RN7SKP256-201ENST00000517201 314 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 BTF3P12-201ENST00000519620 469 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC005730.3-201ENST00000583067 366 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC104984.5-201ENST00000586878 94 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AL355877.2-201ENST00000603670 358 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AL022345.1-201ENST00000607292 135 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC022306.2-201ENST00000617563 647 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 MIR6134-201ENST00000617606 109 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC009248.2-201ENST00000619826 254 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC092794.2-201ENST00000620933 563 ntBASIC2.89□□□□□ -1.95
DDX4Q9NQI0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX4Q9NQI0 SNORA51.4-201ENST00000364993 124 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 SNORA32.2-201ENST00000384049 122 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 RN7SKP32-201ENST00000410167 303 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 RN7SKP223-201ENST00000410582 62 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 HMGN2P10-201ENST00000448085 265 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AC026436.1-201ENST00000510537 270 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 Y_RNA.702-201ENST00000516843 96 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 AC005498.1-201ENST00000592125 465 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
DDX4Q9NQI0 ADAM3A-203ENST00000461344 2157 ntBASIC2.88□□□□□ -1.95
DDX4Q9NQI0 CDC27P3-201ENST00000635418 1910 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC016717.2-201ENST00000609089 5141 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RNU6-845P-201ENST00000362578 103 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 Z98749.2-208ENST00000381646 500 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RNU6-128P-201ENST00000383976 107 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RNU6-72P-201ENST00000384285 79 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 U3.37-201ENST00000408528 213 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC093151.1-201ENST00000427711 313 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RPS15AP5-201ENST00000436276 388 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 IFNA20P-201ENST00000436840 528 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 MTND4LP16-201ENST00000440828 295 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC117503.1-201ENST00000472241 394 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RPS29P20-201ENST00000489592 171 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.87□□□□□ -1.95
DDX4Q9NQI0 TBCAP3-201ENST00000512475 312 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RNA5SP281-201ENST00000516504 135 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 SNORD19.2-201ENST00000516978 73 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AC107953.1-201ENST00000522216 297 ntBASIC2.87□□□□□ -1.95
DDX4Q9NQI0 AP004607.1-201ENST00000524456 203 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms