Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 MIR3662-201ENST00000637030 95 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AL109809.4-201ENST00000603520 2185 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AL359854.1-201ENST00000614203 1594 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USP44Q9H0E7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.94
USP44Q9H0E7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
USP44Q9H0E7 MIR6073-201ENST00000352083 89 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 RNU5E-7P-201ENST00000365290 117 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 FTH1P15-201ENST00000406984 280 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 MED28P2-201ENST00000475771 317 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 RPL21P99-201ENST00000480369 423 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC018437.1-201ENST00000492214 406 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC010486.1-201ENST00000511793 424 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 RNA5SP112-201ENST00000515937 99 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 RNU6-189P-201ENST00000516120 101 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 Y_RNA.687-201ENST00000516558 91 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 SNORA25.17-201ENST00000517184 124 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC109329.1-201ENST00000518744 317 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC023050.3-201ENST00000541142 333 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.9□□□□□ -1.95
USP44Q9H0E7 MIR3670-2-201ENST00000582974 65 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 MIR3670-1-201ENST00000584160 65 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 MIR3670-3-201ENST00000584855 65 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 MIR3670-4-201ENST00000612260 65 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC244517.12-201ENST00000623581 663 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 AC121333.1-201ENST00000567488 2709 ntBASIC2.9□□□□□ -1.95
USP44Q9H0E7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP44Q9H0E7 RNU6-486P-201ENST00000363116 107 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 Y_RNA.231-201ENST00000364358 102 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 RNU6-1303P-201ENST00000364841 107 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 DEFA7P-201ENST00000382676 285 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 MIR627-201ENST00000384979 97 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 RNA5SP390-201ENST00000410191 113 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 POLHP1-201ENST00000411806 470 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 PGBD4P6-201ENST00000421501 610 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 ERLEC1P1-201ENST00000433806 578 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC124916.1-201ENST00000444020 547 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 SNORA43.2-201ENST00000516652 128 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 COPS8P3-201ENST00000526024 482 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 COX6CP5-201ENST00000527162 228 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 AP001094.1-201ENST00000579805 193 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC008121.1-201ENST00000603244 268 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 RNU6-89P-201ENST00000606519 100 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC010378.1-201ENST00000619270 362 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 MIR7515-201ENST00000637837 67 ntBASIC2.89□□□□□ -1.95
USP44Q9H0E7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.89□□□□□ -1.95
USP44Q9H0E7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP44Q9H0E7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP44Q9H0E7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP44Q9H0E7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 Y_RNA.378-201ENST00000365652 113 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP44Q9H0E7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 SRIP2-201ENST00000428470 166 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 AL121601.2-201ENST00000438019 707 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 snoU109.2-201ENST00000459316 135 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 RNU6-1208P-201ENST00000459588 107 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 RNA5SP24-201ENST00000516478 95 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 AC078814.3-201ENST00000553036 491 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 MIR4801-201ENST00000582704 82 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 MIR4298-201ENST00000584380 73 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 MIR4765-201ENST00000585007 77 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 VN1R107P-201ENST00000601784 209 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 RBM11P1-201ENST00000604951 799 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.88□□□□□ -1.95
USP44Q9H0E7 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
USP44Q9H0E7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP44Q9H0E7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP44Q9H0E7 RNU6-858P-201ENST00000362436 107 ntBASIC2.87□□□□□ -1.95
USP44Q9H0E7 RNU6-266P-201ENST00000364225 107 ntBASIC2.87□□□□□ -1.95
USP44Q9H0E7 RNU6-301P-201ENST00000384277 107 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms