Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC103810.1-201ENST00000579873 453 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC091152.3-201ENST00000604227 325 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC131280.1-202ENST00000624067 4211 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC138393.1-203ENST00000327086 343 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.324-201ENST00000365165 102 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.480-201ENST00000384364 102 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.554-201ENST00000384672 102 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 TBCAP3-201ENST00000512475 312 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNU1-86P-201ENST00000516108 154 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNU1-107P-201ENST00000516617 154 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 BTF3P12-201ENST00000519620 469 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AP004607.1-201ENST00000524456 203 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AK6P1-201ENST00000540219 478 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 GLYCAM1-201ENST00000546596 285 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC136619.2-201ENST00000563361 631 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AL021997.1-201ENST00000605757 193 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.15-201ENST00000611544 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.16-201ENST00000613119 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.12-201ENST00000613778 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.20-201ENST00000613956 192 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.9-201ENST00000615427 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.11-201ENST00000616345 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.2-201ENST00000616535 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U4.5-201ENST00000617137 123 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.3-201ENST00000617785 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.19-201ENST00000618602 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 RNU2-1-201ENST00000618664 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.6-201ENST00000619225 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.5-201ENST00000619465 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 U2.10-201ENST00000620268 191 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 YWHAEP7-203ENST00000622054 312 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC022418.1-201ENST00000624118 445 ntBASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF541Q9H0D2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.453-201ENST00000384223 109 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 SNORA17.3-201ENST00000391159 129 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 RNU6-607P-201ENST00000411283 108 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 FCF1P9-201ENST00000412546 282 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AC138623.1-201ENST00000418060 216 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AL669831.1-202ENST00000428504 417 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AC108667.1-201ENST00000428618 249 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 HMGB1P31-201ENST00000437242 427 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 FABP5P14-201ENST00000437273 393 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 GTF2IP13-201ENST00000438487 386 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 MTCO3P38-201ENST00000468910 766 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 RNU2-69P-201ENST00000516061 100 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 RNU6-1038P-201ENST00000516516 104 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.687-201ENST00000516558 91 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 MIR4765-201ENST00000585007 77 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AL391813.1-201ENST00000603098 260 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AC008121.1-201ENST00000603244 268 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 DISC2.1-201ENST00000612827 205 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 MIR6766-201ENST00000622641 72 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 SCARNA4-202ENST00000625402 129 ntBASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ZNF541Q9H0D2 CDC27P3-201ENST00000635418 1910 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 AL139276.1-201ENST00000311910 1001 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNU6-527P-201ENST00000363425 104 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNU6-1303P-201ENST00000364841 107 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNU6-384P-201ENST00000364900 104 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNU6-72P-201ENST00000384285 79 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.505-201ENST00000384489 102 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RNA5SP219-201ENST00000390940 113 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 SNORA16.2-201ENST00000390991 127 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 AL133475.1-201ENST00000404414 305 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 FTH1P15-201ENST00000406984 280 ntBASIC2.66□□□□□ -1.98
ZNF541Q9H0D2 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms