Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC115990.1-201ENST00000526957 301 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC107016.2-201ENST00000547968 190 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 MIR5692C1-201ENST00000585309 91 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC091135.1-201ENST00000585943 307 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AP003465.2-201ENST00000602571 373 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC005046.1-201ENST00000608515 625 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC068944.2-201ENST00000610373 403 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC009233.1-201ENST00000616477 371 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
HERPUD2Q9BSE4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 RNU1-72P-201ENST00000362976 153 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.89-201ENST00000363031 102 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.295-201ENST00000364918 102 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-214P-201ENST00000384130 107 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 SNORA44-201ENST00000384584 132 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 RPS29P13-201ENST00000402041 169 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC022018.1-201ENST00000430685 241 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 UBE2V1P8-201ENST00000437166 265 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 MTATP6P23-201ENST00000440153 476 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 MTND4P18-201ENST00000447010 465 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 snoU13.14-201ENST00000459372 104 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AL121594.1-201ENST00000475906 575 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 MIR4801-201ENST00000582704 82 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AL713866.2-201ENST00000603579 219 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC069234.5-201ENST00000611056 416 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC090517.3-201ENST00000625170 141 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC024614.3-201ENST00000637860 256 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 AC241585.2-209ENST00000638217 143 ntBASIC2.96□□□□□ -1.94
HERPUD2Q9BSE4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-522P-201ENST00000364497 107 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-692P-201ENST00000384496 107 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 MIR512-1-201ENST00000384913 84 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 MIR634-201ENST00000385208 97 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-332P-201ENST00000391193 108 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AL445529.1-201ENST00000398713 389 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 CBX3P9-201ENST00000402326 552 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.615-201ENST00000410769 117 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 SRIP2-201ENST00000428470 166 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 MTND1P4-201ENST00000435196 415 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AC092989.1-201ENST00000481235 277 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-718P-201ENST00000516166 105 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-586P-201ENST00000517265 104 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 AC093249.1-201ENST00000567049 203 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 MIR3688-2-201ENST00000636963 87 ntBASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 Y_RNA.256-201ENST00000364594 104 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 MIR450B-201ENST00000401182 78 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 EIF1P1-201ENST00000421436 341 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 AL359672.1-201ENST00000442302 409 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 RPL30P1-201ENST00000488676 339 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 AP005902.1-201ENST00000521358 186 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 CBX3P7-201ENST00000532876 502 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 AL159153.1-201ENST00000619688 317 ntBASIC2.94□□□□□ -1.94
HERPUD2Q9BSE4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 RNU6-851P-201ENST00000384565 107 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 MRPS10P2-201ENST00000431226 381 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 USP9YP8-201ENST00000441913 500 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 HMGN2P26-201ENST00000463169 339 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 AC008628.2-201ENST00000502605 298 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 AC090136.1-201ENST00000520009 240 ntBASIC2.93□□□□□ -1.94
HERPUD2Q9BSE4 AP005597.4-201ENST00000526762 229 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms