Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU6-74P-201ENST00000384235 107 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 SNORA24.1-201ENST00000384401 135 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU6-843P-201ENST00000384454 104 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU1-57P-201ENST00000384491 166 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL390237.1-201ENST00000404226 1415 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
FOXC2Q99958 ELOCP4-201ENST00000420090 333 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL365338.1-201ENST00000422282 858 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 MTCYBP5-201ENST00000423752 1135 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 RPL23AP30-201ENST00000432419 501 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 MTATP6P16-201ENST00000434543 526 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC244505.5-201ENST00000443639 207 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AL118520.1-201ENST00000450770 291 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 MED28P2-201ENST00000475771 317 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC091965.2-201ENST00000512324 613 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC117532.1-201ENST00000514638 323 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXC2Q99958 Y_RNA.695-201ENST00000516715 107 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AP002963.1-201ENST00000530590 184 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 NDUFA5P6-201ENST00000542110 379 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 MIR4528-201ENST00000577763 90 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL031274.2-201ENST00000599419 203 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 SEPT7P9-203ENST00000604116 343 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AL121992.2-201ENST00000606262 256 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 Y_RNA.783-201ENST00000613546 102 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 AC099842.1-201ENST00000619919 596 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 SDR42E1P4-201ENST00000620894 481 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
FOXC2Q99958 AC024940.5-201ENST00000622889 474 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
FOXC2Q99958 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
FOXC2Q99958 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.69□□□□□ -2.14
FOXC2Q99958 ZNF702P-202ENST00000434269 1966 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 RNU6-858P-201ENST00000362436 107 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 RNA5SP37-201ENST00000365420 130 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FOXC2Q99958 Y_RNA.553-201ENST00000384670 102 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AL591034.2-201ENST00000402839 359 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 Y_RNA.623-201ENST00000411128 95 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
FOXC2Q99958 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC096920.1-201ENST00000423991 241 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.69□□□□□ -2.14
FOXC2Q99958 AC008267.5-201ENST00000424928 265 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 MTCO1P19-201ENST00000443487 500 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC079448.1-201ENST00000449377 373 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FOXC2Q99958 RPL23AP3-201ENST00000453844 468 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AL583843.1-201ENST00000456070 346 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.69□□□□□ -2.14
FOXC2Q99958 AC079804.2-201ENST00000490376 200 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC022493.1-201ENST00000492984 337 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC090255.1-201ENST00000495779 349 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 RPL23AP63-201ENST00000498752 471 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 SNORD27.1-201ENST00000516319 72 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 SNORA25.15-201ENST00000516487 89 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 SNORA18.6-201ENST00000516792 115 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 RNU6-685P-201ENST00000517088 95 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.69□□□□□ -2.14
FOXC2Q99958 AC135279.1-201ENST00000543493 504 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.69□□□□□ -2.14
FOXC2Q99958 CR383656.8-201ENST00000549046 145 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 MIR4287-201ENST00000579398 78 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC008521.1-201ENST00000587471 187 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC008749.1-201ENST00000597650 306 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC119751.7-201ENST00000600494 245 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC245008.1-201ENST00000608123 476 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC109347.2-201ENST00000610220 349 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AL133173.2-201ENST00000614270 90 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 AC093648.1-201ENST00000623546 606 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
FOXC2Q99958 MTND4P1-201ENST00000457501 1466 ntBASIC1.69□□□□□ -2.14
FOXC2Q99958 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
FOXC2Q99958 RBBP8P1-201ENST00000449447 1844 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 HAUS6P2-201ENST00000433254 2404 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.68□□□□□ -2.14
FOXC2Q99958 MIR412-201ENST00000362142 91 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU6-942P-201ENST00000363002 107 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU1-23P-201ENST00000363361 144 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 U3.13-201ENST00000364804 214 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU6-487P-201ENST00000365430 104 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU6-108P-201ENST00000365558 107 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 OR5H15-201ENST00000383696 930 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU6-1032P-201ENST00000384100 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms