Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 BX679664.1-201ENST00000434429 253 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 AC098831.1-201ENST00000440661 216 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 LINC01399-202ENST00000458450 244 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 AC010401.1-201ENST00000463867 348 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF1Q92994 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF1Q92994 RNU7-175P-201ENST00000515915 61 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 RNU6-1023P-201ENST00000516137 106 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.680-201ENST00000516441 93 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 AP003733.2-201ENST00000529409 171 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRF1Q92994 MIR6798-201ENST00000612887 67 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF1Q92994 SRP72P2-201ENST00000344851 1979 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BRF1Q92994 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF1Q92994 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF1Q92994 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4□□□□□ -1.77
BRF1Q92994 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4□□□□□ -1.77
BRF1Q92994 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRF1Q92994 RNU6-942P-201ENST00000363002 107 ntBASIC4□□□□□ -1.77
BRF1Q92994 RNU6-708P-201ENST00000384217 107 ntBASIC4□□□□□ -1.77
BRF1Q92994 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
BRF1Q92994 MIR888-201ENST00000401186 77 ntBASIC4□□□□□ -1.77
BRF1Q92994 RNU6-130P-201ENST00000411112 103 ntBASIC4□□□□□ -1.77
BRF1Q92994 RPS29P4-201ENST00000414733 161 ntBASIC4□□□□□ -1.77
BRF1Q92994 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4□□□□□ -1.77
BRF1Q92994 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4□□□□□ -1.77
BRF1Q92994 MTCO3P29-201ENST00000432119 779 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC021205.2-201ENST00000480069 347 ntBASIC4□□□□□ -1.77
BRF1Q92994 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4□□□□□ -1.77
BRF1Q92994 MTND1P19-201ENST00000511780 315 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC108043.1-201ENST00000512696 574 ntBASIC4□□□□□ -1.77
BRF1Q92994 IGKV2-26-201ENST00000518305 343 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC107934.2-201ENST00000518653 310 ntBASIC4□□□□□ -1.77
BRF1Q92994 H3F3AP1-201ENST00000559984 334 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4□□□□□ -1.77
BRF1Q92994 RPL23AP78-201ENST00000599928 470 ntBASIC4□□□□□ -1.77
BRF1Q92994 B3GNTL1P2-201ENST00000603673 288 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC141273.2-201ENST00000618989 130 ntBASIC4□□□□□ -1.77
BRF1Q92994 AC078938.1-201ENST00000620993 318 ntBASIC4□□□□□ -1.77
BRF1Q92994 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
BRF1Q92994 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRF1Q92994 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRF1Q92994 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4□□□□□ -1.77
BRF1Q92994 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.99□□□□□ -1.77
BRF1Q92994 PWAR6-201ENST00000552334 4618 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRF1Q92994 RNU1-73P-201ENST00000383971 164 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 Y_RNA.458-201ENST00000384240 102 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 AC126124.2-201ENST00000413542 321 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 RPL23AP82-202ENST00000427528 469 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 HMGN2P31-201ENST00000432430 273 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 CENPBD1P1-201ENST00000464061 469 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 AC067942.3-201ENST00000512025 362 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.99□□□□□ -1.77
BRF1Q92994 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 AC012468.1-201ENST00000604888 430 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.99□□□□□ -1.77
BRF1Q92994 AL110115.1-201ENST00000614396 364 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.99□□□□□ -1.77
BRF1Q92994 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRF1Q92994 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRF1Q92994 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
BRF1Q92994 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.99□□□□□ -1.77
BRF1Q92994 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRF1Q92994 FAM35BP-202ENST00000497389 3337 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.98□□□□□ -1.77
BRF1Q92994 AL353746.1-201ENST00000566293 6881 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AL672296.1-201ENST00000427780 2158 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RNU4-9P-201ENST00000364951 139 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 Y_RNA.358-201ENST00000365491 99 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.98□□□□□ -1.77
BRF1Q92994 RNU6-658P-201ENST00000384606 106 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RNU6-1093P-201ENST00000391194 107 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL21P75-201ENST00000396599 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 PTMAP2-201ENST00000397627 327 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL21P28-201ENST00000401418 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RNU2-38P-201ENST00000410856 79 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AL590556.1-201ENST00000423231 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 HMGN2P30-201ENST00000423237 256 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.98□□□□□ -1.77
BRF1Q92994 AC092017.2-201ENST00000427600 362 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL37P4-201ENST00000448908 268 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RNU7-170P-201ENST00000459303 61 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL21P39-201ENST00000463605 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL23AP67-201ENST00000465341 474 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL39P38-201ENST00000467018 153 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC034236.1-201ENST00000469891 373 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC087190.1-201ENST00000484462 480 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC107032.1-201ENST00000485945 480 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC132942.1-201ENST00000486753 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC093591.1-201ENST00000491435 481 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RPL21P16-201ENST00000495531 483 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 Y_RNA.706-201ENST00000516933 99 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 RN7SKP289-201ENST00000517244 295 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC007458.1-201ENST00000542812 373 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AP002770.2-201ENST00000543613 532 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms