Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MTND5P16-201ENST00000460269 1703 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNED1Q8TER0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 Y_RNA.146-201ENST00000363549 102 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-522P-201ENST00000364497 107 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 CD24P4-201ENST00000382840 243 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC074085.1-201ENST00000413598 418 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC114491.1-201ENST00000416095 246 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC018630.2-202ENST00000422992 927 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RPS3AP52-201ENST00000435639 297 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC107399.1-201ENST00000451226 265 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU7-180P-201ENST00000459240 63 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC116337.1-201ENST00000509680 687 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL359273.1-201ENST00000510918 627 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-864P-201ENST00000516256 108 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 Y_RNA.711-201ENST00000516993 102 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR4506-201ENST00000584693 77 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR4424-201ENST00000585257 86 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR3942-201ENST00000585264 109 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 CTHRC1P1-201ENST00000605383 469 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR6845-201ENST00000613182 61 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 uc_338.11-201ENST00000619132 160 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL512643.1-201ENST00000635735 524 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC008568.2-201ENST00000623862 2313 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL139276.1-201ENST00000311910 1001 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-179P-201ENST00000363350 107 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-511P-201ENST00000363496 107 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 Y_RNA.144-201ENST00000363521 113 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 Y_RNA.197-201ENST00000364004 102 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-1078P-201ENST00000364522 103 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 Y_RNA.339-201ENST00000365325 102 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-882P-201ENST00000391025 103 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNY4P36-201ENST00000391116 96 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RPL7L1P10-201ENST00000427790 463 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL162395.1-201ENST00000457882 422 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 SNORA70.16-201ENST00000516390 95 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 RNU6-1088P-201ENST00000516850 104 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AP000763.2-201ENST00000540641 163 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC007151.1-201ENST00000572774 483 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR4703-201ENST00000577728 79 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC136443.5-201ENST00000603741 370 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC019193.3-201ENST00000609144 554 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC092807.2-201ENST00000609367 243 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC093838.1-201ENST00000613014 469 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 uc_338.34-201ENST00000617467 174 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 MIR6873-201ENST00000622788 63 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AC011155.2-201ENST00000623202 216 ntBASIC2.76□□□□□ -1.97
SNED1Q8TER0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.76□□□□□ -1.97
SNED1Q8TER0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC080128.1-201ENST00000474389 1917 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RNU6-1252P-201ENST00000363054 104 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 Y_RNA.187-201ENST00000363918 113 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RNU1-91P-201ENST00000364746 163 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNED1Q8TER0 SNORA22B-201ENST00000383876 138 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RNU6-639P-201ENST00000384074 107 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 MIR221-201ENST00000385135 110 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 MIR548F5-201ENST00000408421 86 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RPL37P10-201ENST00000412884 288 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNED1Q8TER0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AL031183.1-201ENST00000457667 207 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 RPL39P5-202ENST00000512505 151 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC093303.1-201ENST00000514549 295 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RNU6-566P-201ENST00000516790 107 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.75□□□□□ -1.97
SNED1Q8TER0 AL118558.2-201ENST00000556294 238 ntBASIC2.75□□□□□ -1.97
SNED1Q8TER0 AL133153.1-201ENST00000557756 303 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms