Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-1059P-201ENST00000363752 98 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-1027P-201ENST00000383998 107 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 Y_RNA.496-201ENST00000384444 101 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-1179P-201ENST00000384667 107 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 MIR517A-201ENST00000385001 87 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 MIR301A-201ENST00000385261 86 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 SNORD73A-201ENST00000386062 65 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-1106P-201ENST00000390845 107 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 Z92545.1-201ENST00000411782 234 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 Z85995.1-201ENST00000415547 335 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-470P-201ENST00000515954 104 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU1-86P-201ENST00000516108 154 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-1256P-201ENST00000516539 103 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNA5SP384-201ENST00000516615 116 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU1-107P-201ENST00000516617 154 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 RNU6-143P-201ENST00000516942 93 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 AP003122.3-201ENST00000526316 255 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AC084851.1-201ENST00000529105 249 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AC079600.2-201ENST00000550076 130 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 EIF4BP1-201ENST00000554881 351 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 AL117187.1-201ENST00000555482 181 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 MIR1273C-201ENST00000578669 77 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 7SK.10-201ENST00000621414 298 ntBASIC3.51□□□□□ -1.85
SSH3Q8TE77 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSH3Q8TE77 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.51□□□□□ -1.85
SSH3Q8TE77 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSH3Q8TE77 RNA5SP139-201ENST00000364340 117 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 Y_RNA.364-201ENST00000365532 101 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 RNU6-395P-201ENST00000365662 106 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 RNY1P14-201ENST00000384426 108 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 MIR548F4-201ENST00000408515 105 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 RNU6-985P-201ENST00000410182 104 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 AC243428.1-201ENST00000421099 264 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 AL031183.1-201ENST00000457667 207 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 HMGB1P30-201ENST00000492455 606 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 AC097462.2-201ENST00000504623 481 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 SNORA25.10-201ENST00000515926 124 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 Y_RNA.661-201ENST00000516003 99 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 HSPE1P7-201ENST00000604681 321 ntBASIC3.5□□□□□ -1.85
SSH3Q8TE77 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSH3Q8TE77 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SSH3Q8TE77 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSH3Q8TE77 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 Y_RNA.2-201ENST00000362330 96 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 Y_RNA.33-201ENST00000362591 102 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNU6-490P-201ENST00000362985 107 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 Y_RNA.151-201ENST00000363566 112 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 Y_RNA.324-201ENST00000365165 102 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNU6-842P-201ENST00000384269 107 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNU6-331P-201ENST00000384724 107 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 MIR181A2-201ENST00000384863 110 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 MIR181B1-201ENST00000385240 110 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 Y_RNA.605-201ENST00000410577 105 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 GSTA11P-201ENST00000452866 669 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 FABP5P15-201ENST00000453566 214 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC003982.1-202ENST00000469928 248 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC011005.2-201ENST00000487324 359 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC022493.2-201ENST00000506122 481 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC091826.1-201ENST00000514065 313 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNU6-307P-201ENST00000516743 106 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNU6-699P-201ENST00000517081 110 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 RNA5SP380-201ENST00000517190 98 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 AP000867.2-201ENST00000532468 320 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 OR1M4P-201ENST00000589199 287 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC006157.1-201ENST00000611750 366 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AC010205.1-201ENST00000616668 449 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 AL132822.1-201ENST00000617063 513 ntBASIC3.49□□□□□ -1.85
SSH3Q8TE77 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSH3Q8TE77 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.48□□□□□ -1.85
SSH3Q8TE77 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SSH3Q8TE77 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SSH3Q8TE77 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSH3Q8TE77 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
SSH3Q8TE77 RNU6-196P-201ENST00000384315 107 ntBASIC3.48□□□□□ -1.85
SSH3Q8TE77 AL445529.1-201ENST00000398713 389 ntBASIC3.48□□□□□ -1.85
SSH3Q8TE77 AC008267.5-201ENST00000424928 265 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms