Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL158211.1-201ENST00000566763 763 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL133445.2-201ENST00000611191 527 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC024581.2-201ENST00000619986 252 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 SNORD51-201ENST00000384320 80 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 RPS15AP9-201ENST00000439856 381 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 HSPE1P9-201ENST00000440046 311 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC136619.2-201ENST00000563361 631 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC091057.3-201ENST00000602684 733 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC011939.3-201ENST00000613686 466 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AP003072.5-201ENST00000623872 773 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 SNORA4.1-201ENST00000364263 144 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 SNORD114-3-201ENST00000364969 75 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU6-31P-201ENST00000384388 108 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU6-160P-201ENST00000384591 107 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC113420.1-201ENST00000507903 571 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC110760.3-202ENST00000515177 371 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC027104.1-201ENST00000563702 681 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC091152.3-201ENST00000604227 325 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC068647.2-201ENST00000637380 353 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU2-48P-201ENST00000410694 191 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RPS26P5-201ENST00000418544 335 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 MTCO2P25-201ENST00000447065 681 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU6-491P-201ENST00000516099 110 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 RNU6-567P-201ENST00000516746 107 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC022616.8-201ENST00000533569 253 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 MRPS36P5-201ENST00000551909 298 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC090079.2-201ENST00000575289 768 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AL590240.4-201ENST00000616908 390 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 AC017104.5-201ENST00000637647 639 ntBASIC0.03□□□□□ -2.4
ALMS1Q8TCU4 SNORA25B-201ENST00000365507 128 ntBASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 RNU4-54P-201ENST00000516428 129 ntBASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 AC109329.1-201ENST00000518744 317 ntBASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 AL355802.4-201ENST00000607635 548 ntBASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.03□□□□□ -2.41
ALMS1Q8TCU4 RNU6-386P-201ENST00000362650 107 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 RNU6-1151P-201ENST00000384684 107 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AL355796.1-201ENST00000406706 323 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 PPP1R11P2-201ENST00000423543 382 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC244098.3-201ENST00000424803 96 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 RPL30P1-201ENST00000488676 339 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 RN7SKP287-201ENST00000516546 266 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 HIGD1AP6-201ENST00000521833 279 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC104417.1-201ENST00000523974 751 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AL512310.8-201ENST00000550183 120 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AP001596.2-201ENST00000608410 312 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 RMST_4.1-201ENST00000616886 107 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC073968.1-201ENST00000618594 637 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 CENPUP1-201ENST00000526649 1202 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AL583856.2-201ENST00000606298 543 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC009237.15-201ENST00000610252 501 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 MIR6134-201ENST00000617606 109 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC092447.10-201ENST00000620607 1652 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 RNA5SP327-201ENST00000362494 101 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 Y_RNA.413-201ENST00000384007 102 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 Y_RNA.495-201ENST00000384435 112 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 SNORA48.1-201ENST00000390879 135 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 SNORD89-201ENST00000390981 114 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 AC138623.1-201ENST00000418060 216 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 FAM204CP-201ENST00000424489 642 ntBASIC0.02□□□□□ -2.41
ALMS1Q8TCU4 PTGES3P4-201ENST00000426243 356 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms