Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC018448.1-201ENST00000552843 316 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AC105137.2-201ENST00000569073 466 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 RN7SL600P-201ENST00000581811 299 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 MIR3609-201ENST00000582661 80 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 BPIFA4P-203ENST00000603168 689 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AC008739.3-201ENST00000603262 127 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AL078605.1-201ENST00000603529 500 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AC005828.6-201ENST00000606610 232 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX5Q8N196 AC015914.2-201ENST00000618167 288 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX5Q8N196 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SIX5Q8N196 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX5Q8N196 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX5Q8N196 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SIX5Q8N196 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX5Q8N196 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX5Q8N196 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX5Q8N196 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX5Q8N196 RNU6-270P-201ENST00000364131 105 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 Y_RNA.308-201ENST00000365043 101 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 SNORA1.3-201ENST00000384676 136 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 MIR208B-201ENST00000401172 77 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 RPL23AP82-202ENST00000427528 469 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 RPL35AP21-201ENST00000437667 333 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX5Q8N196 SNORD2.1-201ENST00000458762 69 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX5Q8N196 AC005868.1-201ENST00000536421 331 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX5Q8N196 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX5Q8N196 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX5Q8N196 MIR3136-201ENST00000583498 78 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX5Q8N196 AL356575.1-201ENST00000603008 283 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 MIR8069-1-201ENST00000616627 86 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 MIR8069-2-201ENST00000621412 86 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 AC099654.7-201ENST00000635788 2127 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 SNORD98-201ENST00000636377 67 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX5Q8N196 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX5Q8N196 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX5Q8N196 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
SIX5Q8N196 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SIX5Q8N196 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX5Q8N196 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX5Q8N196 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX5Q8N196 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX5Q8N196 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX5Q8N196 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX5Q8N196 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX5Q8N196 Y_RNA.170-201ENST00000363746 110 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 Y_RNA.262-201ENST00000364641 102 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 Y_RNA.304-201ENST00000365011 112 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 RNA5SP240-201ENST00000365355 128 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 RNU6-245P-201ENST00000384020 107 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 RNU6-1310P-201ENST00000384153 107 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX5Q8N196 RNU6-918P-201ENST00000391219 106 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 RN7SKP51-201ENST00000410781 304 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 AL591419.1-201ENST00000427423 339 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 AL606753.1-201ENST00000427435 87 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX5Q8N196 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX5Q8N196 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX5Q8N196 CYP4A27P-201ENST00000567218 190 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 HMGN2P15-201ENST00000585707 270 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX5Q8N196 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX5Q8N196 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
SIX5Q8N196 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX5Q8N196 AC008725.1-201ENST00000605123 2263 ntBASIC4.52□□□□□ -1.69
SIX5Q8N196 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX5Q8N196 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX5Q8N196 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX5Q8N196 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 AF117829.1-206ENST00000621883 3802 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SIX5Q8N196 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX5Q8N196 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX5Q8N196 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 RNA5SP130-201ENST00000364431 114 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 Y_RNA.240-201ENST00000364469 95 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 RPL21P65-201ENST00000406094 466 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 RAB28P5-201ENST00000427490 651 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 GOT2P5-201ENST00000433995 546 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 AL121594.1-201ENST00000475906 575 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 RPS29P26-201ENST00000477483 171 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 RNA5SP49-201ENST00000516450 115 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX5Q8N196 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 RN7SL703P-201ENST00000578485 302 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 BX322639.1-202ENST00000423987 2213 ntBASIC4.51□□□□□ -1.69
SIX5Q8N196 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms